RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 PCDHB7Q9Y5E2 793 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 RALGAPA2Q2PPJ7 1873 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 PLXNA4Q9HCM2 1894 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 CCDC169A6NNP5 214 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 TBKBP1A7MCY6 615 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 GAS2O43903 313 aaKnown RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 TSPAN1O60635 241 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 FAM189BP81408 668 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 UBXN1Q04323 297 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 MXD4Q14582 209 aaPredicted RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 AMHR2Q16671 573 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 CCDC40Q4G0X9 1142 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 EPC2Q52LR7 807 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 EXOC8Q8IYI6 725 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 CCDC150Q8NCX0 1101 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 GOLGA5Q8TBA6 731 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 CACTINQ8WUQ7 758 aaKnown RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 IFT74Q96LB3 600 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 ACCSQ96QU6 501 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 TGS1Q96RS0 853 aaKnown RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 EIF2AQ9BY44 585 aaKnown RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 PRDM6Q9NQX0 595 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 AGPAT5Q9NUQ2 364 aa15.12■□□□□ 0.01
SERF1B-204ENST00000506542 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.12■□□□□ 0.01
SERF1B-204ENST00000506542 PBX3P40426 434 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 PHKA2P46019 1235 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 AFF1P51825 1210 aaKnown RBP15.11■□□□□ 0.01
SERF1B-204ENST00000506542 ERVK-21P61565 698 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 ARID5BQ14865 1188 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 CLLU1OSQ5K130 101 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 UBXN11Q5T124 520 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 SRGAP1Q7Z6B7 1085 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 LRRC8AQ8IWT6 810 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 SYCP3Q8IZU3 236 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 FIBCD1Q8N539 461 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 HELQQ8TDG4 1101 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 KCNN1Q92952 543 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 IKZF4Q9H2S9 585 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 AGPAT3Q9NRZ7 376 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 C1orf112Q9NSG2 853 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 HES2Q9Y543 173 aa15.11■□□□□ 0.01
SERF1B-204ENST00000506542 A0A1W2PQC6 194 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 ESPNB1AK53 854 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 H0YCG3 227 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 CLIC2O15247 247 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 SLC16A3O15427 465 aaKnown RBP15.1■□□□□ 0.01
SERF1B-204ENST00000506542 ABCD1P33897 745 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 CTNNB1P35222 781 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 SNRPFP62306 86 aaKnown RBP15.1■□□□□ 0.01
SERF1B-204ENST00000506542 CDC42EP1Q00587 391 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 MYBPC2Q14324 1141 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 PPP2R5AQ15172 486 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 VWA3BQ502W6 1294 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 ARMCX5Q6P1M9 558 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 FRMD5Q7Z6J6 570 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 ZNF598Q86UK7 904 aaKnown RBP15.1■□□□□ 0.01
SERF1B-204ENST00000506542 SLC9A9Q8IVB4 645 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 TMEM192Q8IY95 271 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 MAFAQ8NHW3 353 aaPredicted RBP15.1■□□□□ 0.01
SERF1B-204ENST00000506542 TMEM174Q8WUU8 243 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 GAS2L1Q99501 681 aaPredicted RBP15.1■□□□□ 0.01
SERF1B-204ENST00000506542 DMAC2Q9NW81 257 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 CGNQ9P2M7 1197 aaKnown RBP15.1■□□□□ 0.01
SERF1B-204ENST00000506542 ARHGAP28Q9P2N2 729 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 TBX20Q9UMR3 447 aa15.1■□□□□ 0.01
SERF1B-204ENST00000506542 A0A0U1RQF3 1178 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 PES1O00541 588 aaKnown RBP15.09■□□□□ 0.01
SERF1B-204ENST00000506542 ASAP2O43150 1006 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 ERLIN2O94905 339 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 STAG3L1P0CL83 205 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 ARF4P18085 180 aaPredicted RBP15.09■□□□□ 0.01
SERF1B-204ENST00000506542 SCP2P22307 547 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 NAMPTP43490 491 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 LRMPQ12912 555 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 TFDP1Q14186 410 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 MAP4K3Q8IVH8 894 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 TRIM59Q8IWR1 403 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 C12orf56Q8IXR9 622 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 CASD1Q96PB1 797 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 NDST4Q9H3R1 872 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 FAM105AQ9NUU6 356 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 TMEM161AQ9NX61 479 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 EXOC7Q9UPT5 735 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 BRWD1Q9NSI6 2320 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 AKAP3O75969 853 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 FKBP15Q5T1M5 1219 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 CDCA2Q69YH5 1023 aaPredicted RBP15.09■□□□□ 0.01
SERF1B-204ENST00000506542 ZNF710Q8N1W2 664 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 ERGIC2Q96RQ1 377 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 MKNK1Q9BUB5 465 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 ALG13Q9NP73 1137 aaKnown RBP15.09■□□□□ 0.01
SERF1B-204ENST00000506542 PCDHB2Q9Y5E7 798 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.09■□□□□ 0.01
SERF1B-204ENST00000506542 MTCH2Q9Y6C9 303 aa15.09■□□□□ 0.01
SERF1B-204ENST00000506542 EPB41P11171 864 aaKnown RBP15.08■□□□□ 0
SERF1B-204ENST00000506542 CASP4P49662 377 aa15.08■□□□□ 0
SERF1B-204ENST00000506542 TRIM14Q14142 442 aa15.08■□□□□ 0
SERF1B-204ENST00000506542 CEP135Q66GS9 1140 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms