RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 NHEJ1Q9H9Q4 299 aaPredicted RBP13□□□□□ -0.33
POLR2J3-211ENST00000506060 SIX2Q9NPC8 291 aa13□□□□□ -0.33
POLR2J3-211ENST00000506060 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
POLR2J3-211ENST00000506060 NOD1Q9Y239 953 aa13□□□□□ -0.33
POLR2J3-211ENST00000506060 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
POLR2J3-211ENST00000506060 TRPV2Q9Y5S1 764 aa13□□□□□ -0.33
POLR2J3-211ENST00000506060 FHOD1Q9Y613 1164 aa13□□□□□ -0.33
POLR2J3-211ENST00000506060 KBTBD13C9JR72 458 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 ABLIM1O14639 778 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 GFPT2O94808 682 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 EDN1P05305 212 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 ACLYP53396 1101 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 YARSP54577 528 aaKnown RBP12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 ITGA7Q13683 1181 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 SNX17Q15036 470 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 ZACNQ401N2 412 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 EEF1DP3Q658K8 133 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 IQCEQ6IPM2 695 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 CCSAPQ6IQ19 270 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 WDR59Q6PJI9 974 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 RAD9BQ6WBX8 426 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 SERINC5Q86VE9 423 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 NT5DC4Q86YG4 428 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 FAM212AQ96EL1 285 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 PPP1R13BQ96KQ4 1090 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 ACAP3Q96P50 834 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 OSMRQ99650 979 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 CELF4Q9BZC1 486 aaKnown RBP12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 UBE2TQ9NPD8 197 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 RRAGDQ9NQL2 400 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 TRMT1Q9NXH9 659 aaKnown RBP12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 ADGRG1Q9Y653 693 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 PTCH2Q9Y6C5 1203 aa12.99□□□□□ -0.33
POLR2J3-211ENST00000506060 TTLL13PA6NNM8 815 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 FAM189A1O60320 539 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 B4GALT4O60513 344 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 CAND2O75155 1236 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 HLA-DRAP01903 254 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 IQCF3P0C7M6 154 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 STAG3L1P0CL83 205 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 TBXAS1P24557 533 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 SOX5P35711 763 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 EIF4A3P38919 411 aaKnown RBP12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 GRM5P41594 1212 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 PRKCIP41743 596 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 JAM2P57087 298 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 TMEM62Q0P6H9 643 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 PTK7Q13308 1070 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 TRPC3Q13507 836 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 PTGISQ16647 500 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 ARHGAP29Q52LW3 1261 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 GDF6Q6KF10 455 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 DPY19L2P1Q6NXN4 242 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 C15orf39Q6ZRI6 1047 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 TOGARAM2Q6ZUX3 1019 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 KIAA1328Q86T90 577 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 HACE1Q8IYU2 909 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 C17orf53Q8N3J3 647 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 LMO3Q8TAP4 145 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 JAKMIP2Q96AA8 810 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 TSPAN18Q96SJ8 248 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 POP1Q99575 1024 aaKnown RBP12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 CHP1Q99653 195 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 TSGA10Q9BZW7 698 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 PLEKHA5Q9HAU0 1116 aa12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 TOPORSQ9NS56 1045 aaPredicted RBP12.98□□□□□ -0.33
POLR2J3-211ENST00000506060 A0A0U1RQG5 324 aaPredicted RBP12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 F8VZ95 297 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 CLSTN1O94985 981 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 C4BPAP04003 597 aaKnown RBP12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 KIF11P52732 1056 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 ZNF200P98182 395 aaPredicted RBP12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 GCNT1Q02742 428 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 MTF1Q14872 753 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 ENOX2Q16206 610 aaKnown RBP12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 C10orf76Q5T2E6 689 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 PPM1KQ8N3J5 372 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 TAS1R2Q8TE23 839 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 TAF4BQ92750 862 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 ARHGAP20Q9P2F6 1191 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 PTPN22Q9Y2R2 807 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 DERAQ9Y315 318 aa12.97□□□□□ -0.33
POLR2J3-211ENST00000506060 MROH7Q68CQ1 1323 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 GPR182O15218 404 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 XPOTO43592 962 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 KRT86O43790 486 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 CSDE1O75534 798 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 NPTXRO95502 500 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 TNNT1P13805 278 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 TNFSF9P41273 254 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 BPIFB4P59827 614 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 OSTNP61366 133 aa12.96□□□□□ -0.33
POLR2J3-211ENST00000506060 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms