RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 SSX2IPQ9Y2D8 614 aa11.47□□□□□ -0.57
BRIX1-202ENST00000506023 USP24Q9UPU5 2620 aa11.47□□□□□ -0.57
BRIX1-202ENST00000506023 NCANO14594 1321 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 CPLX1O14810 134 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 C1RP00736 705 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 SPATA31C1P0DKV0 1188 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 GCFC2P16383 781 aaKnown RBP11.46□□□□□ -0.57
BRIX1-202ENST00000506023 TGM1P22735 817 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 TARSP26639 723 aaKnown RBP11.46□□□□□ -0.57
BRIX1-202ENST00000506023 PSMA5P28066 241 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 POU5F1BQ06416 359 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 TUSC3Q13454 348 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 PSMD5Q16401 504 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 FAM171A1Q5VUB5 890 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 TSSK4Q6SA08 328 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 MAEAQ7L5Y9 396 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 DGLUCYQ7Z3D6 616 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 NPAS3Q8IXF0 933 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 GPR65Q8IYL9 337 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 ING5Q8WYH8 240 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 NELL1Q92832 810 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 TMEM60Q9H2L4 133 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 FZD8Q9H461 694 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.46□□□□□ -0.57
BRIX1-202ENST00000506023 PARP2Q9UGN5 583 aa11.46□□□□□ -0.57
BRIX1-202ENST00000506023 EML5Q05BV3 1969 aa11.46□□□□□ -0.58
BRIX1-202ENST00000506023 MYH11P35749 1972 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 ZMYM2Q9UBW7 1377 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 KANSL1LA0AUZ9 987 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 I3L4J1 428 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
BRIX1-202ENST00000506023 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
BRIX1-202ENST00000506023 DKC1O60832 514 aaKnown RBP eCLIP11.45□□□□□ -0.58
BRIX1-202ENST00000506023 MED24O75448 989 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 DGAT1O75907 488 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 KRT37O76014 449 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 RECQL4O94761 1208 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 ST3GAL1Q11201 340 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 MXD4Q14582 209 aaPredicted RBP11.45□□□□□ -0.58
BRIX1-202ENST00000506023 MLF2Q15773 248 aaPredicted RBP11.45□□□□□ -0.58
BRIX1-202ENST00000506023 RSPO4Q2I0M5 234 aaPredicted RBP11.45□□□□□ -0.58
BRIX1-202ENST00000506023 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
BRIX1-202ENST00000506023 OTUD6AQ7L8S5 288 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 CEP57Q86XR8 500 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 NOSTRINQ8IVI9 506 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 SLC7A14Q8TBB6 771 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 RUBCNQ92622 972 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 MTMR9Q96QG7 549 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 TTPALQ9BTX7 342 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 CCDC113Q9H0I3 377 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 SEMA4AQ9H3S1 761 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 GOLGA2P5Q9HBQ8 144 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 LTB4R2Q9NPC1 389 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 ANKEF1Q9NU02 776 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 CYP46A1Q9Y6A2 500 aa11.45□□□□□ -0.58
BRIX1-202ENST00000506023 TSC2P49815 1807 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 SF3B1O75533 1304 aaKnown RBP eCLIP11.44□□□□□ -0.58
BRIX1-202ENST00000506023 CFAP47Q6ZTR5 3102 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 PFKFB2O60825 505 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 TADA2AO75478 443 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 TDGF1P13385 188 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 RFX1P22670 979 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 FCARP24071 287 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 HOXC13P31276 330 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 SOX4Q06945 474 aaPredicted RBP11.44□□□□□ -0.58
BRIX1-202ENST00000506023 PCBP1Q15365 356 aaKnown RBP eCLIP11.44□□□□□ -0.58
BRIX1-202ENST00000506023 SLC44A4Q53GD3 710 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 GLRA4Q5JXX5 417 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 EXOC8Q8IYI6 725 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 FAM177A1Q8N128 213 aaPredicted RBP11.44□□□□□ -0.58
BRIX1-202ENST00000506023 CEP120Q8N960 986 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 NECAB1Q8N987 351 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 ZBTB44Q8NCP5 570 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
BRIX1-202ENST00000506023 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 KIFC3Q9BVG8 833 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 TM6SF1Q9BZW5 370 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 TRIM6Q9C030 488 aaPredicted RBP11.44□□□□□ -0.58
BRIX1-202ENST00000506023 TTC12Q9H892 705 aaPredicted RBP11.44□□□□□ -0.58
BRIX1-202ENST00000506023 PARD6AQ9NPB6 346 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 POLIQ9UNA4 740 aa11.44□□□□□ -0.58
BRIX1-202ENST00000506023 DENND4CQ5VZ89 1909 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 NUP210Q8TEM1 1887 aaPredicted RBP11.43□□□□□ -0.58
BRIX1-202ENST00000506023 LRRIQ4A6NIV6 560 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 BTBD18B2RXH4 712 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 LILRB5O75023 590 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 HNRNPA1P09651 372 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRIX1-202ENST00000506023 CEBPBP17676 345 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 FGFR3P22607 806 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 TKTP29401 623 aaKnown RBP11.43□□□□□ -0.58
BRIX1-202ENST00000506023 OR1D2P34982 312 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 CCR2P41597 374 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 TXKP42681 527 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 BRCC3P46736 316 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 FOSBP53539 338 aa11.43□□□□□ -0.58
BRIX1-202ENST00000506023 RAB33AQ14088 237 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms