RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 KIFAP3Q92845 792 aa13.45□□□□□ -0.26
SNHG4-202ENST00000505522 IFT74Q96LB3 600 aa13.45□□□□□ -0.26
SNHG4-202ENST00000505522 SH2B1Q9NRF2 756 aaPredicted RBP13.45□□□□□ -0.26
SNHG4-202ENST00000505522 DDX19AQ9NUU7 478 aaKnown RBP13.45□□□□□ -0.26
SNHG4-202ENST00000505522 FBXW11Q9UKB1 542 aa13.45□□□□□ -0.26
SNHG4-202ENST00000505522 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
SNHG4-202ENST00000505522 PCDHB6Q9Y5E3 794 aa13.45□□□□□ -0.26
SNHG4-202ENST00000505522 KRBA1A5PL33 1030 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 E9PMD0 336 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 ST18O60284 1047 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 CFHP08603 1231 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 LAMP2P13473 410 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 AOC1P19801 751 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 PTGDRQ13258 359 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 PDIA5Q14554 519 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 IL17AQ16552 155 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 DCAF4L1Q3SXM0 396 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 ATF7IP2Q5U623 682 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 DAW1Q8N136 415 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 SLC44A3Q8N4M1 653 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 SNX29Q8TEQ0 813 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
SNHG4-202ENST00000505522 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNHG4-202ENST00000505522 DOCK8Q8NF50 2099 aa13.44□□□□□ -0.26
SNHG4-202ENST00000505522 VPS13AQ96RL7 3174 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 VWA8A3KMH1 1905 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 PROB1E7EW31 1015 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 K7ERI5 159 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 CDC25AP30304 524 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 NBL1P41271 181 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 CLCNKBP51801 687 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 PEX3P56589 373 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 NTHL1P78549 312 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 ELAVL2Q12926 359 aaKnown RBP13.43□□□□□ -0.26
SNHG4-202ENST00000505522 HTR4Q13639 388 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 CD300LGQ6UXG3 332 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 TAS1R3Q7RTX0 852 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 GRASPQ7Z6J2 395 aaPredicted RBP13.43□□□□□ -0.26
SNHG4-202ENST00000505522 CEP120Q8N960 986 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 RUSC1Q9BVN2 902 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 GOLGA2P5Q9HBQ8 144 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 WNT16Q9UBV4 365 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 CA14Q9ULX7 337 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 CFAP54Q96N23 3096 aa13.43□□□□□ -0.26
SNHG4-202ENST00000505522 CACNA1HO95180 2353 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 CCDC169A6NNP5 214 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 ANHXE9PGG2 379 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 TMEM189-UBE2V1I3L0A0 370 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 I3L4J1 428 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 CCL16O15467 120 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 HIP1RO75146 1068 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 C8AP07357 584 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 SRFP11831 508 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 FGFR3P22607 806 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 FSHRP23945 695 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 NPTX2P47972 431 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 MAPK7Q13164 816 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 UPP1Q16831 310 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 C8orf34Q49A92 452 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 PPM1LQ5SGD2 360 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 LIN9Q5TKA1 542 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 PDXDC1Q6P996 788 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 DCLRE1AQ6PJP8 1040 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 RSPO2Q6UXX9 243 aaPredicted RBP13.42□□□□□ -0.26
SNHG4-202ENST00000505522 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.42□□□□□ -0.26
SNHG4-202ENST00000505522 ASCL5Q7RTU5 278 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 KCNK18Q7Z418 384 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 CCDC105Q8IYK2 499 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 C3orf58Q8NDZ4 430 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 NXPE3Q969Y0 559 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 ACO2Q99798 780 aaKnown RBP13.42□□□□□ -0.26
SNHG4-202ENST00000505522 RTP3Q9BQQ7 232 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 MMTAG2Q9BU76 263 aaKnown RBP13.42□□□□□ -0.26
SNHG4-202ENST00000505522 CDT1Q9H211 546 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 PTPRHQ9HD43 1115 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 DNM3Q9UQ16 869 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 TNFSF13BQ9Y275 285 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 DMDP11532 3685 aa13.42□□□□□ -0.26
SNHG4-202ENST00000505522 PHLPP2Q6ZVD8 1323 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 DOCK6Q96HP0 2047 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 SMIM28A0A1B0GU29 152 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 B3GAT3O94766 335 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 HNRNPA1P09651 372 aaKnown RBP eCLIP13.41□□□□□ -0.26
SNHG4-202ENST00000505522 TKTP29401 623 aaKnown RBP13.41□□□□□ -0.26
SNHG4-202ENST00000505522 OR1D2P34982 312 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 GRM5P41594 1212 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 BRCC3P46736 316 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 OSTNP61366 133 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 SOX4Q06945 474 aaPredicted RBP13.41□□□□□ -0.26
SNHG4-202ENST00000505522 RAB33AQ14088 237 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 XKR4Q5GH76 650 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 AXDND1Q5T1B0 1012 aaPredicted RBP13.41□□□□□ -0.26
SNHG4-202ENST00000505522 KRT79Q5XKE5 535 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 RINT1Q6NUQ1 792 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 ALKAL1Q6UXT8 129 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 FRMD5Q7Z6J6 570 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 DTWD2Q8NBA8 298 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 SLC7A14Q8TBB6 771 aa13.41□□□□□ -0.26
SNHG4-202ENST00000505522 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms