RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 EHHADHQ08426 723 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 DCAF4L1Q3SXM0 396 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 ZPBP2Q6X784 338 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 UNC13DQ70J99 1090 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 VN1R2Q8NFZ6 395 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 SUSD6Q92537 303 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 ADPGKQ9BRR6 497 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 CDT1Q9H211 546 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 MRPL44Q9H9J2 332 aaKnown RBP18.46■□□□□ 0.55
SYNE4-207ENST00000505054 RSAD1Q9HA92 442 aa18.46■□□□□ 0.55
SYNE4-207ENST00000505054 PER2O15055 1255 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 KLRC4O43908 158 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 OFD1O75665 1012 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 PIGRP01833 764 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 PRR29P0C7W0 189 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 MYBP10242 640 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 ITGA4P13612 1032 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 AFF1P51825 1210 aaKnown RBP18.45■□□□□ 0.54
SYNE4-207ENST00000505054 FAM160A1Q05DH4 1040 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 SIGLEC14Q08ET2 396 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 ZNF568Q3ZCX4 644 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 GLB1LQ6UWU2 654 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 CLEC17AQ6ZS10 378 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 LRRC55Q6ZSA7 311 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 ABI1Q8IZP0 508 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 FBXL6Q8N531 539 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 GLIS3Q8NEA6 775 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 ZBTB45Q96K62 511 aaPredicted RBP18.45■□□□□ 0.54
SYNE4-207ENST00000505054 RPGRIP1Q96KN7 1286 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 APOL6Q9BWW8 343 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 LZTS1Q9Y250 596 aa18.45■□□□□ 0.54
SYNE4-207ENST00000505054 PVALEFA0A1B0GWK0 134 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 TOM1L1O75674 476 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 GCNT3O95395 438 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 AKAP5P24588 427 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 ABCD1P33897 745 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 ERVFC1P60507 584 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 RBM10P98175 930 aaKnown RBP18.44■□□□□ 0.54
SYNE4-207ENST00000505054 KCNA1Q09470 495 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 SLC39A4Q6P5W5 647 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 MPZL3Q6UWV2 235 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 LRRC43Q8N309 656 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 CEP120Q8N960 986 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 HVCN1Q96D96 273 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 BICD1Q96G01 975 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 HAPLN2Q9GZV7 340 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 IKZF4Q9H2S9 585 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 CWH43Q9H720 699 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 TYW1Q9NV66 732 aaKnown RBP18.44■□□□□ 0.54
SYNE4-207ENST00000505054 INPP5FQ9Y2H2 1132 aa18.44■□□□□ 0.54
SYNE4-207ENST00000505054 HNRNPDLO14979 420 aaKnown RBP18.43■□□□□ 0.54
SYNE4-207ENST00000505054 INPPL1O15357 1258 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 MYL1P05976 194 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 MCF2P10911 925 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 MLH1P40692 756 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 LIG4P49917 911 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 NOMO2Q5JPE7 1267 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 FAM26FQ5R3K3 315 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 L1TD1Q5T7N2 865 aaKnown RBP18.43■□□□□ 0.54
SYNE4-207ENST00000505054 IER5LQ5T953 404 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 PLPP4Q5VZY2 271 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 TMEM184AQ6ZMB5 413 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 ZBTB33Q86T24 672 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 HACE1Q8IYU2 909 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 GAD1Q99259 594 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 PHOX2BQ99453 314 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 SNTG2Q9NY99 539 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 ANKFY1Q9P2R3 1169 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 GIT1Q9Y2X7 761 aa18.43■□□□□ 0.54
SYNE4-207ENST00000505054 TISP43B9A030 160 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 ANKRD63C9JTQ0 380 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 B4GALT3O60512 393 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 NR1I2O75469 434 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 RECQL4O94761 1208 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 HARSP12081 509 aaKnown RBP18.42■□□□□ 0.54
SYNE4-207ENST00000505054 PPM1AP35813 382 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 PLCB3Q01970 1234 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 MCL1Q07820 350 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 DPYDQ12882 1025 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 ALCAMQ13740 583 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 KCNC3Q14003 757 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 NOLC1Q14978 699 aaKnown RBP eCLIP18.42■□□□□ 0.54
SYNE4-207ENST00000505054 PTPN21Q16825 1174 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 ANKRD54Q6NXT1 300 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 APBB1IPQ7Z5R6 666 aaPredicted RBP18.42■□□□□ 0.54
SYNE4-207ENST00000505054 RSPH1Q8WYR4 309 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 ZFP42Q96MM3 310 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 TCHPQ9BT92 498 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 MRPL9Q9BYD2 267 aaKnown RBP18.42■□□□□ 0.54
SYNE4-207ENST00000505054 UBN1Q9NPG3 1134 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 ENTPD7Q9NQZ7 604 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 TBC1D13Q9NVG8 400 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 KLK14Q9P0G3 267 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 PARP2Q9UGN5 583 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 PCDHB13Q9Y5F0 798 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 ZMYM2Q9UBW7 1377 aa18.42■□□□□ 0.54
SYNE4-207ENST00000505054 ARL5CA6NH57 179 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 CLDN3O15551 220 aa18.41■□□□□ 0.54
SYNE4-207ENST00000505054 PRPF40AO75400 957 aaKnown RBP18.41■□□□□ 0.54
SYNE4-207ENST00000505054 PRPF6O94906 941 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms