RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 UBE3CQ15386 1083 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 BTNL9Q6UXG8 535 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 CPT1CQ8TCG5 803 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 CPPED1Q9BRF8 314 aaPredicted RBP6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 PDCD2LQ9BRP1 358 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 PRSS50Q9UI38 385 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 FZD1Q9UP38 647 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 SYNMO15061 1565 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 SPATA31D1Q6ZQQ2 1576 aa6.59□□□□□ -1.35
DEPDC1B-203ENST00000505017 ERVK-7P63135 1459 aa6.59□□□□□ -1.36
DEPDC1B-203ENST00000505017 NRXN1Q9ULB1 1477 aa6.59□□□□□ -1.36
DEPDC1B-203ENST00000505017 CLTCQ00610 1675 aaKnown RBP6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 ROCK2O75116 1388 aaKnown RBP6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 LEFTY2O00292 366 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 MAFGO15525 162 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 DNAJC6O75061 913 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 LSSP48449 732 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 MGAT5Q09328 741 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 FSTL1Q12841 308 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 VPS72Q15906 364 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 BROXQ5VW32 411 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 KIAA0907Q7Z7F0 614 aaPredicted RBP6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 OR5M3Q8NGP4 307 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 FERMT2Q96AC1 680 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 IL17RAQ96F46 866 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 EMC7Q9NPA0 242 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 PPLO60437 1756 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 ZFYVE9O95405 1425 aa6.58□□□□□ -1.36
DEPDC1B-203ENST00000505017 ZMYM3Q14202 1370 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 WNT10BO00744 389 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 NRP1O14786 923 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 FKBP9O95302 570 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 ITGB1P05556 798 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 APOBEC3AP31941 199 aaPredicted RBP6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 PDCD1Q15116 288 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 PITRM1Q5JRX3 1037 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 METTL24Q5JXM2 366 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 ANKS6Q68DC2 871 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 ABHD15Q6UXT9 468 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 FKBP9P1Q75LS8 142 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 PASD1Q8IV76 773 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 TEX101Q9BY14 249 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 KCNH6Q9H252 994 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 CHST2Q9Y4C5 530 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 KDM5AP29375 1690 aaKnown RBP6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 PCSK5Q92824 1860 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 UGGT1Q9NYU2 1555 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 SETBP1Q9Y6X0 1596 aa6.57□□□□□ -1.36
DEPDC1B-203ENST00000505017 CENPVL1A0A0U1RR11 272 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 LPXNO60711 386 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 SCAF4O95104 1147 aaKnown RBP6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 LSP1P33241 339 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 ADRA1BP35368 520 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 GPR15P49685 360 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 GZMKP49863 264 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 SCNN1BP51168 640 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 PPARAQ07869 468 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 LRRC55Q6ZSA7 311 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 DOK3Q7L591 496 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 PPM1KQ8N3J5 372 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 PROKR1Q8TCW9 393 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 MFSD3Q96ES6 412 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 FEZ1Q99689 392 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 NDC1Q9BTX1 674 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 DKK2Q9UBU2 259 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 CCDC7Q96M83 1385 aa6.56□□□□□ -1.36
DEPDC1B-203ENST00000505017 IQGAP1P46940 1657 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 TMEM131LA2VDJ0 1609 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 ST20-MTHFSA0A0A6YYL1 179 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 TRIM24O15164 1050 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 CDC45O75419 566 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 WNT3AP56704 352 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 CCDC178Q5BJE1 867 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 FAM83AQ86UY5 434 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 ZG16BQ96DA0 208 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 EIF3AQ14152 1382 aaKnown RBP6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 NEXMIFQ5QGS0 1516 aa6.55□□□□□ -1.36
DEPDC1B-203ENST00000505017 SCAF11Q99590 1463 aaKnown RBP6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 PIK3C2GO75747 1445 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 KDM1AO60341 852 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 GCP02774 474 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 IL2P60568 153 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 DUSP2Q05923 314 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 CCDC62Q6P9F0 684 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 FRMD7Q6ZUT3 714 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 DNAJC10Q8IXB1 793 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 SLC5A5Q92911 643 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 FER1L4A9Z1Z3 1794 aa6.54□□□□□ -1.36
DEPDC1B-203ENST00000505017 NLRP1Q9C000 1473 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 WASHC2AQ641Q2 1341 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 TMEM191CA6NGB0 347 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 ABHD16AO95870 558 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 LPLP06858 475 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 LTA4HP09960 611 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 BPIP17213 487 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 ID4P47928 161 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 KRTAP1-1Q07627 177 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 IDI1Q13907 227 aa6.53□□□□□ -1.36
DEPDC1B-203ENST00000505017 DDB1Q16531 1140 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms