RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 DKK3Q9UBP4 350 aa7.35□□□□□ -1.23
SSBP2-204ENST00000504985 TUBGCP4Q9UGJ1 667 aa7.35□□□□□ -1.23
SSBP2-204ENST00000504985 LIMCH1Q9UPQ0 1083 aa7.35□□□□□ -1.23
SSBP2-204ENST00000504985 CD2APQ9Y5K6 639 aa7.35□□□□□ -1.23
SSBP2-204ENST00000504985 CYP2D7A0A087X1C5 515 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 GPR75-ASB3A0A0A6YYF3 556 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 CCDC162PA2VCL2 907 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 PPIP5K2O43314 1243 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 PFDN1O60925 122 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 SFPQP23246 707 aaKnown RBP eCLIP7.34□□□□□ -1.23
SSBP2-204ENST00000504985 SMARCA1P28370 1054 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 BTDP43251 543 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 ZNF165P49910 485 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 PRELPP51888 382 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 PPARAQ07869 468 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 CBX3Q13185 183 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 PKP1Q13835 747 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 ME3Q16798 604 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 MAP1SQ66K74 1059 aaPredicted RBP7.34□□□□□ -1.23
SSBP2-204ENST00000504985 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 Q6ZUG5 572 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 ZNF365Q70YC5 407 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 CYB5R4Q7L1T6 521 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 SRGAP1Q7Z6B7 1085 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 UBE2Q1Q7Z7E8 422 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.34□□□□□ -1.23
SSBP2-204ENST00000504985 RTKN2Q8IZC4 609 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 SYCP3Q8IZU3 236 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 LRRC43Q8N309 656 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 TOP6BLQ8N6T0 577 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 SUPT20HQ8NEM7 779 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 VPS37AQ8NEZ2 397 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 NLGN2Q8NFZ4 835 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 TMEM40Q8WWA1 233 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 MAIP1Q8WWC4 291 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 ATP6V0A1Q93050 837 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 MPP4Q96JB8 637 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 TRAPPC9Q96Q05 1148 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 SMC6Q96SB8 1091 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 LRRC2Q9BYS8 371 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 NACAP1Q9BZK3 213 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 DCP1AQ9NPI6 582 aaPredicted RBP7.34□□□□□ -1.23
SSBP2-204ENST00000504985 WDR35Q9P2L0 1181 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 PUF60Q9UHX1 559 aaKnown RBP7.34□□□□□ -1.23
SSBP2-204ENST00000504985 C15orf41Q9Y2V0 281 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 IKBKGQ9Y6K9 419 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 ROBO3Q96MS0 1386 aa7.34□□□□□ -1.23
SSBP2-204ENST00000504985 USP27XA6NNY8 438 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 TMEM110-MUSTN1A8MSY1 372 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 B4E1Z4 1266 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 BIRC5O15392 142 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 TTI1O43156 1089 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 FLOT1O75955 427 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 CYP2D6P10635 497 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 MAGEA10P43363 369 aaPredicted RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 FKBP1AP62942 108 aaKnown RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 MRPS25P82663 173 aaKnown RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 PLCB3Q01970 1234 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 NSUN2Q08J23 767 aaKnown RBP eCLIP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 ANKRD1Q15327 319 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 GNPTABQ3T906 1256 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 DALRD3Q5D0E6 543 aaKnown RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 STRIP1Q5VSL9 837 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 SLC23A3Q6PIS1 610 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 CEP128Q6ZU80 1094 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 CHST3Q7LGC8 479 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 UBE3DQ7Z6J8 389 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 RALYLQ86SE5 291 aaKnown RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 SPACA3Q8IXA5 215 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 FUKQ8N0W3 1084 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 FBXL16Q8N461 479 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 NCOA7Q8NI08 942 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 GRIN3AQ8TCU5 1115 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 NEK9Q8TD19 979 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 NSMCE1Q8WV22 266 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 BRF1Q92994 677 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 GFM2Q969S9 779 aaKnown RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 MAML3Q96JK9 1138 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 MIS12Q9H081 205 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 TNMDQ9H2S6 317 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 ZNF277Q9NRM2 450 aaPredicted RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 ATP8A2Q9NTI2 1148 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 GALNT8Q9NY28 637 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 C6orf203Q9P0P8 240 aaPredicted RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 CARD8Q9Y2G2 431 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 TTLL3Q9Y4R7 772 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 BZW2Q9Y6E2 419 aaKnown RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 COMMD10Q9Y6G5 202 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 SLC4A7Q9Y6M7 1214 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 WDR19Q8NEZ3 1342 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 WDR90Q96KV7 1748 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 SIPA1L1O43166 1804 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 MYH1P12882 1939 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 FLT1P17948 1338 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 PNMA6FA0A0J9YX94 578 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 LRRC10BA6NIK2 292 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 F8W031 263 aaPredicted RBP7.33□□□□□ -1.24
SSBP2-204ENST00000504985 DTNBO60941 627 aa7.33□□□□□ -1.24
SSBP2-204ENST00000504985 LDHCP07864 332 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms