RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 TRIM29Q14134 588 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 BTNL9Q6UXG8 535 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 BRAPQ7Z569 592 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 SCUBE1Q8IWY4 988 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 TMEM145Q8NBT3 493 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 FRS2Q8WU20 508 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 LPAR1Q92633 364 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 DIO2Q92813 273 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 KIAA1683Q9H0B3 1180 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 GLT8D2Q9H1C3 349 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 SP110Q9HB58 689 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 AS3MTQ9HBK9 375 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 NCOA5Q9HCD5 579 aaKnown RBP6.94□□□□□ -1.3
COL4A5-207ENST00000504541 ARHGEF4Q9NR80 690 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 FAM53CQ9NYF3 392 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 NAP1L2Q9ULW6 460 aaPredicted RBP6.94□□□□□ -1.3
COL4A5-207ENST00000504541 MTMR6Q9Y217 621 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 LAMA4Q16363 1823 aa6.94□□□□□ -1.3
COL4A5-207ENST00000504541 DICER1Q9UPY3 1922 aaKnown RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 NOTOA8MTQ0 251 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 GOLGA6L22H0YM25 854 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 H3BQV1 296 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 MPHOSPH10O00566 681 aaKnown RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 JAK2O60674 1132 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 SCG5P05408 212 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 FGFR1P11362 822 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 PNLIPP16233 465 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 U2AF2P26368 475 aaKnown RBP eCLIP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 CALML3P27482 149 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 NF2P35240 595 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 USP14P54578 494 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 ICA1Q05084 483 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 ZNF543Q08ER8 600 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 SEPT2Q15019 361 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 PKN1Q16512 942 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 PFKFB3Q16875 520 aaPredicted RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 SKOR2Q2VWA4 1001 aaPredicted RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 E4F1Q66K89 784 aaPredicted RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 MCTP2Q6DN12 878 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 USP53Q70EK8 1073 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 NLRX1Q86UT6 975 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 PPIL6Q8IXY8 311 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 SCYL3Q8IZE3 742 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 SRBD1Q8N5C6 995 aaKnown RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 SAMD3Q8N6K7 520 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 CCDC12Q8WUD4 166 aaPredicted RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 CHURC1Q8WUH1 139 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 TNPO1Q92973 898 aaKnown RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 MTMR8Q96EF0 704 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 CHAMP1Q96JM3 812 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 MMP19Q99542 508 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 PLCD4Q9BRC7 762 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 ALG1Q9BT22 464 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 SLC6A17Q9H1V8 727 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 FOXP1Q9H334 677 aaPredicted RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 CRTAC1Q9NQ79 661 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 GGA3Q9NZ52 723 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 CFAP45Q9UL16 551 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 ZBTB21Q9ULJ3 1066 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 YBX2Q9Y2T7 364 aaKnown RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 MORC2Q9Y6X9 1032 aaPredicted RBP6.93□□□□□ -1.3
COL4A5-207ENST00000504541 SBF1O95248 1867 aa6.93□□□□□ -1.3
COL4A5-207ENST00000504541 FOCADQ5VW36 1801 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 ESYT2A0FGR8 921 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 CXCL11O14625 94 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 DLX3O60479 287 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 SCG2P13521 617 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 GNA11P29992 359 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 SLC1A4P43007 532 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 MAP4K2Q12851 820 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 RRP1BQ14684 758 aaKnown RBP6.92□□□□□ -1.3
COL4A5-207ENST00000504541 KIR3DS1Q14943 382 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 SAFBQ15424 915 aaKnown RBP eCLIP6.92□□□□□ -1.3
COL4A5-207ENST00000504541 YOD1Q5VVQ6 348 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-207ENST00000504541 SLFN13Q68D06 897 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 MIGA2Q7L4E1 593 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 KRT26Q7Z3Y9 468 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 FAM160B2Q86V87 743 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.92□□□□□ -1.3
COL4A5-207ENST00000504541 NPLOC4Q8TAT6 608 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 RRP36Q96EU6 259 aaKnown RBP6.92□□□□□ -1.3
COL4A5-207ENST00000504541 DDX11Q96FC9 970 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 LIN37Q96GY3 246 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-207ENST00000504541 C12orf42Q96LP6 360 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 ANP32EQ9BTT0 268 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 MYL10Q9BUA6 226 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 SLC26A6Q9BXS9 759 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 SCAND2PQ9GZW5 306 aaPredicted RBP6.92□□□□□ -1.3
COL4A5-207ENST00000504541 VCPKMTQ9H867 229 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 PDLIM7Q9NR12 457 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 FEM1BQ9UK73 627 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 ACSL6Q9UKU0 697 aa6.92□□□□□ -1.3
COL4A5-207ENST00000504541 DDX60LQ5H9U9 1706 aaKnown RBP6.92□□□□□ -1.3
COL4A5-207ENST00000504541 TRBV23-1A0A0A0MS06 115 aa6.91□□□□□ -1.3
COL4A5-207ENST00000504541 A0A1W2PRG0 241 aa6.91□□□□□ -1.3
COL4A5-207ENST00000504541 C7orf72A4D263 438 aa6.91□□□□□ -1.3
COL4A5-207ENST00000504541 BAG4O95429 457 aaKnown RBP6.91□□□□□ -1.3
COL4A5-207ENST00000504541 MMP1P03956 469 aa6.91□□□□□ -1.3
COL4A5-207ENST00000504541 NCLP19338 710 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms