RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 MTHFRP42898 656 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 NCKAP1LP55160 1127 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 RAD51AP2Q09MP3 1159 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 USP41Q3LFD5 358 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 GLRA4Q5JXX5 417 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 FAM173BQ6P4H8 233 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 TMC5Q6UXY8 1006 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 C15orf39Q6ZRI6 1047 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 USP49Q70CQ1 688 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 BMP8AQ7Z5Y6 402 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 ZNF707Q96C28 371 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 SNX27Q96L92 541 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 MAN1C1Q9NR34 630 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 MTMR6Q9Y217 621 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 CLIC4Q9Y696 253 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 MORC2Q9Y6X9 1032 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 ANK1P16157 1881 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 SMIM28A0A1B0GU29 152 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 TGM5O43548 720 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 FAM189A1O60320 539 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 N4BP1O75113 896 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 RPL17P18621 184 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 PLCG1P19174 1290 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 SP100P23497 879 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 LONP1P36776 959 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 KARSQ15046 597 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 PTPN21Q16825 1174 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 UPP1Q16831 310 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 CES5AQ6NT32 575 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 PRSS55Q6UWB4 352 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 TRIM67Q6ZTA4 783 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 LNX1Q8TBB1 728 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 HASPINQ8TF76 798 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 PIK3R5Q8WYR1 880 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 CLSTN3Q9BQT9 956 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 REEP2Q9BRK0 252 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 MRPL4Q9BYD3 311 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 CCSER1Q9C0I3 900 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 GOLGA2P5Q9HBQ8 144 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 CNTN3Q9P232 1028 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 FBXO2Q9UK22 296 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 USTQ9Y2C2 406 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 SSX2IPQ9Y2D8 614 aa15.36■□□□□ 0.05
PDLIM7-211ENST00000504318 ADAM12O43184 909 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 NR1I2O75469 434 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 RFPL2O75678 378 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 BMP15O95972 392 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 ADH1AP07327 375 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 MCF2P10911 925 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 CLCNKBP51801 687 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 MCM6Q14566 821 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 ZRSR1Q15695 479 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 ZNF568Q3ZCX4 644 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 MPZL3Q6UWV2 235 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 ZDHHC14Q8IZN3 488 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 HDAC7Q8WUI4 952 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 RAD54LQ92698 747 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 RIPOR3Q96MK2 946 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 ODF2LQ9ULJ1 636 aa15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 SF3B1O75533 1304 aaKnown RBP eCLIP15.35■□□□□ 0.05
PDLIM7-211ENST00000504318 VPS37CA5D8V6 355 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 TOM1L1O75674 476 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 GLUD1P00367 558 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 KCNE1P15382 129 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 FGFR3P22607 806 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 MCL1Q07820 350 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 SIGLEC14Q08ET2 396 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 SLC10A6Q3KNW5 377 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 ATAT1Q5SQI0 421 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 RSPO2Q6UXX9 243 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 TMEM130Q8N3G9 435 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 RIN2Q8WYP3 895 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 EPSTI1Q96J88 318 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 TTPALQ9BTX7 342 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 SMOC2Q9H3U7 446 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 FBXW11Q9UKB1 542 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 NR2E1Q9Y466 385 aa15.34■□□□□ 0.05
PDLIM7-211ENST00000504318 TMEM221A6NGB7 291 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 K7ELQ4 463 aaPredicted RBP15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 M0R296 226 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 TADA2AO75478 443 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 PIGRP01833 764 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 SPATA31D3P0C874 917 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 PDCP20941 246 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 PLA2G5P39877 138 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 TMEM132AQ24JP5 1023 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 SPECC1Q5M775 1068 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 FAM171A1Q5VUB5 890 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 SLC39A4Q6P5W5 647 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 ZPBP2Q6X784 338 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 SPATA31D4Q6ZUB0 917 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 ZBTB33Q86T24 672 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 GPBP1Q86WP2 473 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 CLIC6Q96NY7 704 aa15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-211ENST00000504318 A0A087X0B3 334 aa15.32■□□□□ 0.04
PDLIM7-211ENST00000504318 CCDC195A0A1B0GUA6 201 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms