RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 KLHL42Q9P2K6 505 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 KLF15Q9UIH9 416 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 GABRQQ9UN88 632 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 PCDHB2Q9Y5E7 798 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 ITIH6Q6UXX5 1313 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 BTBD18B2RXH4 712 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 SKIP12755 728 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 SREBF1P36956 1147 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 FLT3LGP49771 235 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 ALDH5A1P51649 535 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 DNM1Q05193 864 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 NR5A1Q13285 461 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 PPP1R7Q15435 360 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 OLFML2BQ68BL8 750 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 C11orf57Q6ZUT1 292 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 KRT25Q7Z3Z0 450 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 EHBP1Q8NDI1 1231 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 RASGRP4Q8TDF6 673 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 SPATA17Q96L03 361 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 RPS6KC1Q96S38 1066 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 PDCD2LQ9BRP1 358 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 TPK1Q9H3S4 243 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 IFT122Q9HBG6 1241 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 PXMP2Q9NR77 195 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 ADD3Q9UEY8 706 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 MTMR6Q9Y217 621 aa10.29□□□□□ -0.76
PDLIM5-207ENST00000503974 MYH15Q9Y2K3 1946 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 VPS37CA5D8V6 355 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 EIF4E1BA6NMX2 242 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 KIF28PB7ZC32 967 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 RFC5P40937 340 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 LBX1P52954 281 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 CCDC122Q5T0U0 273 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 DPP9Q86TI2 863 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 SPERTQ8NA61 448 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 NOA1Q8NC60 698 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 NSUN6Q8TEA1 469 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 HAPLN3Q96S86 360 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 RMDN3Q96TC7 470 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 SIKE1Q9BRV8 207 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 PARVGQ9HBI0 331 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 SYNGAP1Q96PV0 1343 aa10.28□□□□□ -0.76
PDLIM5-207ENST00000503974 MCM3APO60318 1980 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 H3BQV1 296 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 EDIL3O43854 480 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 GNA14O95837 355 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 CYP3A4P08684 503 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 PGM5Q15124 567 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 C4orf46Q504U0 113 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 EARS2Q5JPH6 523 aaKnown RBP10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 IFFO2Q5TF58 517 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 XRRA1Q6P2D8 792 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 KDM7AQ6ZMT4 941 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 FAM20CQ8IXL6 584 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 TRMT44Q8IYL2 757 aaKnown RBP10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 SCAIQ8N9R8 606 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 GIPC2Q8TF65 315 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 IFT81Q8WYA0 676 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 CATSPER2Q96P56 530 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 GBA3Q9H227 469 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 EHMT1Q9H9B1 1298 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 GTF3C4Q9UKN8 822 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 MAFFQ9ULX9 164 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 FAM32AQ9Y421 112 aaKnown RBP10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 FADS3Q9Y5Q0 445 aa10.27□□□□□ -0.76
PDLIM5-207ENST00000503974 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 CFAP73A6NFT4 308 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 ASB14A6NK59 587 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 IKBKBO14920 756 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 PPP1R37O75864 691 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 ASLP04424 464 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 CCNCP24863 283 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 MCL1Q07820 350 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 RESTQ13127 1097 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 NONOQ15233 471 aaKnown RBP eCLIP10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 ARHGEF16Q5VV41 709 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 ZCCHC8Q6NZY4 707 aaKnown RBP10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 VSIG10LQ86VR7 867 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 NOSTRINQ8IVI9 506 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 STKLD1Q8NE28 680 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 IL31RAQ8NI17 732 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 PPP1R14CQ8TAE6 165 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 CYFIP2Q96F07 1278 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 HIC2Q96JB3 615 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 PGBD1Q96JS3 809 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 TCF12Q99081 682 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 KATNBL1Q9H079 304 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 MUC3BQ9H195 1237 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 TBCCD1Q9NVR7 557 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 FLRT1Q9NZU1 646 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 KIAA1257Q9ULG3 409 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 TRIM17Q9Y577 477 aa10.27□□□□□ -0.77
PDLIM5-207ENST00000503974 hCG_2014768A0A024R1R8 64 aa10.26□□□□□ -0.77
PDLIM5-207ENST00000503974 LOC105371267A0A1B0GV96 52 aa10.26□□□□□ -0.77
PDLIM5-207ENST00000503974 SPTLC1O15269 473 aa10.26□□□□□ -0.77
PDLIM5-207ENST00000503974 NR3C2P08235 984 aa10.26□□□□□ -0.77
PDLIM5-207ENST00000503974 EIF2AK2P19525 551 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms