RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ST20-MTHFSA0A0A6YYL1 179 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 PRSS38A1L453 326 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 MAFGO15525 162 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 CFBP00751 764 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 LPLP06858 475 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 ENPP1P22413 925 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 CCND1P24385 295 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 GPR3P46089 330 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 RAB27AP51159 221 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 EPHB1P54762 984 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 BCAR1P56945 870 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 ANTXR2P58335 489 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 MCL1Q07820 350 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCBP2Q15366 365 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 CLUL1Q15846 466 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 FSCN1Q16658 493 aaKnown RBP3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 UGT8Q16880 541 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 BEAN1Q3B7T3 259 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 ZBTB41Q5SVQ8 909 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 KIAA1841Q6NSI8 718 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 KANSL1Q7Z3B3 1105 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 FAM83AQ86UY5 434 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 ZBTB46Q86UZ6 589 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 PLXDC1Q8IUK5 500 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 AMOTL1Q8IY63 956 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 C1orf162Q8NEQ5 155 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 RPGRQ92834 1020 aaKnown RBP3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 CHMP4CQ96CF2 233 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 EAF2Q96CJ1 260 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 HOOK2Q96ED9 719 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 FAXDC2Q96IV6 333 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 ZNF768Q9H5H4 540 aaKnown RBP3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 AASDHPPTQ9NRN7 309 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 MKS1Q9NXB0 559 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 TCEAL9Q9UHQ7 104 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 EIF2B4Q9UI10 523 aaKnown RBP3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 EDARQ9UNE0 448 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 CHST2Q9Y4C5 530 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 EID1Q9Y6B2 187 aa3.25□□□□□ -1.89
HMGB1P35-201ENST00000503360 MAST3O60307 1309 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 TRIM75PA6NK02 468 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 MARCH6O60337 910 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 RBMXL2O75526 392 aaKnown RBP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDH8O95206 1070 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 PARNO95453 639 aaKnown RBP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 RBP3P10745 1247 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 SRSF2Q01130 221 aaKnown RBP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 FOXI1Q12951 378 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 PITRM1Q5JRX3 1037 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 TOR2AQ5JU69 321 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 DRICH1Q6PGQ1 229 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 GDF7Q7Z4P5 450 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 PNMA8AQ86V59 439 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 LILRA3Q8N6C8 439 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 CAVIN3Q969G5 261 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 DYDC2Q96IM9 177 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 ORAI2Q96SN7 254 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 SLC13A1Q9BZW2 595 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 QRSL1Q9H0R6 528 aaKnown RBP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 WNT8AQ9H1J5 351 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 MTG2Q9H4K7 406 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 RSAD1Q9HA92 442 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 AKIP1Q9NQ31 210 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 CCM2LQ9NUG4 571 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 DNAJC28Q9NX36 388 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 TLK1Q9UKI8 766 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 NUMBLQ9Y6R0 609 aa3.24□□□□□ -1.89
HMGB1P35-201ENST00000503360 MYPNQ86TC9 1320 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 DNAJC9-AS1A6NH13 148 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 FZD9O00144 591 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 AKAP10O43572 662 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 XPOTO43592 962 aaKnown RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDHGA12O60330 932 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 LPXNO60711 386 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 SNUPNO95149 360 aaKnown RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 HLA-DOAP06340 250 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PFKMP08237 780 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 EGR2P11161 476 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 LGALS4P56470 323 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 GUCY1B3Q02153 619 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 TRIM25Q14258 630 aaKnown RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 ODF1Q14990 250 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 ACAP2Q15057 778 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 NFE2Q16621 373 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 LYSMD2Q8IV50 215 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 RAX2Q96IS3 184 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 CPPED1Q9BRF8 314 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 NOL10Q9BSC4 688 aaKnown RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 DUSP26Q9BV47 211 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PITHD1Q9GZP4 211 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 KCTD10Q9H3F6 313 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PRDM12Q9H4Q4 367 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 SEMA4GQ9NTN9 838 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 ZIM2Q9NZV7 527 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 CHPF2Q9P2E5 772 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 TESQ9UGI8 421 aaKnown RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 IP6K2Q9UHH9 426 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 DPP7Q9UHL4 492 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 MAGEL2Q9UJ55 1249 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms