RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PRKCSHP14314 528 aaPredicted RBP22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 MCCD1P59942 119 aaPredicted RBP22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 FANCCQ00597 558 aa22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 PLCB2Q00722 1185 aa22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 TCERG1LQ5VWI1 586 aa22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 C16orf59Q7L2K0 433 aa22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 POP1Q99575 1024 aaKnown RBP22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 VPS16Q9H269 839 aa22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 TOPORSQ9NS56 1045 aaPredicted RBP22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 KLK14Q9P0G3 267 aa22.14■■□□□ 1.14
CDC42SE2-206ENST00000503291 LACTBL1A8MY62 500 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 EOMESO95936 686 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 MAN2A1Q16706 1144 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 AGMOQ6ZNB7 445 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 USP37Q86T82 979 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 ZNF598Q86UK7 904 aaKnown RBP22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 SLC35C1Q96A29 364 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 PGBD4Q96DM1 585 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 FNBP1Q96RU3 617 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 PLEKHA5Q9HAU0 1116 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 GRPEL1Q9HAV7 217 aa22.14■■□□□ 1.13
CDC42SE2-206ENST00000503291 ABHD14A-ACY1A0A1B0GW23 586 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 TRIM49P0CI25 452 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 TRIM49CP0CI26 452 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 COPB1P53618 953 aaKnown RBP22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 ALKAL1Q6UXT8 129 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 CXCL16Q9H2A7 254 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 LRRIQ3A6PVS8 624 aaPredicted RBP22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 IL18RAPO95256 599 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 PPP2R3AQ06190 1150 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 ENPEPQ07075 957 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 KCNH2Q12809 1159 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 SURF1Q15526 300 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 MIIPQ5JXC2 388 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 C1orf220Q5T0J3 134 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 SNX27Q96L92 541 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 NAP1L5Q96NT1 182 aaPredicted RBP22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 ASB7Q9H672 318 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 NR2E3Q9Y5X4 410 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 CITO14578 2027 aa22.13■■□□□ 1.13
CDC42SE2-206ENST00000503291 AP5Z1O43299 807 aa22.12■■□□□ 1.13
CDC42SE2-206ENST00000503291 TNNI1P19237 187 aa22.12■■□□□ 1.13
CDC42SE2-206ENST00000503291 CLDN10P78369 228 aa22.12■■□□□ 1.13
CDC42SE2-206ENST00000503291 VWA3BQ502W6 1294 aa22.12■■□□□ 1.13
CDC42SE2-206ENST00000503291 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.12■■□□□ 1.134e-6■□□□□ 8.6
CDC42SE2-206ENST00000503291 LBHD1Q9BQE6 289 aaPredicted RBP22.12■■□□□ 1.13
CDC42SE2-206ENST00000503291 TMEM161AQ9NX61 479 aa22.12■■□□□ 1.13
CDC42SE2-206ENST00000503291 GIT1Q9Y2X7 761 aa22.12■■□□□ 1.13
CDC42SE2-206ENST00000503291 LTBP2Q14767 1821 aa22.12■■□□□ 1.13
CDC42SE2-206ENST00000503291 PES1O00541 588 aaKnown RBP22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 TPM2P07951 284 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 EPHB4P54760 987 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 OTOP2Q7RTS6 562 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 CD302Q8IX05 232 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 NDST4Q9H3R1 872 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 ELAC1Q9H777 363 aaKnown RBP22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 RNF19AQ9NV58 838 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 FGBP02675 491 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 ACTN1P12814 892 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 UBASH3AP57075 661 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 PPP3CAQ08209 521 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 XKR4Q5GH76 650 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 LMBRD2Q68DH5 695 aaPredicted RBP22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 ZNF365Q70YC5 407 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 ZNF516Q92618 1163 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 ZFP42Q96MM3 310 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 GAD1Q99259 594 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 MMRN2Q9H8L6 949 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 RSAD1Q9HA92 442 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 UBN1Q9NPG3 1134 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 IFNKQ9P0W0 207 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 PCDHB7Q9Y5E2 793 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 MICAL3Q7RTP6 2002 aa22.11■■□□□ 1.13
CDC42SE2-206ENST00000503291 PTPRJQ12913 1337 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 TTC3P53804 2025 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 MLH1P40692 756 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 JADE1Q6IE81 842 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 SARM1Q6SZW1 724 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 EFCAB13Q8IY85 973 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 ZMAT2Q96NC0 199 aaKnown RBP22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 CGRRF1Q99675 332 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 CNTN3Q9P232 1028 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 TRIP11Q15643 1979 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 ANK1P16157 1881 aa22.1■■□□□ 1.13
CDC42SE2-206ENST00000503291 EFCAB14O75071 495 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 AFPP02771 609 aaKnown RBP22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 GCLMP48507 274 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 AFF1P51825 1210 aaKnown RBP22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 FILIP1LQ4L180 1135 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 WDR49Q8IV35 697 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 CRIPAKQ8N1N5 446 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 GSTCDQ8NEC7 633 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 FAM84AQ96KN4 292 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 A0A1B0GTH6 734 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 SMIM28A0A1B0GU29 152 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 ARL5CA6NH57 179 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 BAIAP3O94812 1187 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 NFICP08651 508 aa22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 TFAMQ00059 246 aaKnown RBP22.09■■□□□ 1.13
CDC42SE2-206ENST00000503291 GLRA4Q5JXX5 417 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms