RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
SCLT1-204ENST00000503215 SOX4Q06945 474 aaPredicted RBP17.86■□□□□ 0.45
SCLT1-204ENST00000503215 DMP1Q13316 513 aaPredicted RBP17.86■□□□□ 0.45
SCLT1-204ENST00000503215 TMEM119Q4V9L6 283 aa17.86■□□□□ 0.45
SCLT1-204ENST00000503215 FBXL6Q8N531 539 aa17.86■□□□□ 0.45
SCLT1-204ENST00000503215 SYT2Q8N9I0 419 aaPredicted RBP17.86■□□□□ 0.45
SCLT1-204ENST00000503215 CMASQ8NFW8 434 aaPredicted RBP17.86■□□□□ 0.45
SCLT1-204ENST00000503215 CLSTN3Q9BQT9 956 aa17.86■□□□□ 0.45
SCLT1-204ENST00000503215 FNIP2Q9P278 1114 aa17.86■□□□□ 0.45
SCLT1-204ENST00000503215 USTQ9Y2C2 406 aa17.86■□□□□ 0.45
SCLT1-204ENST00000503215 SF3B1O75533 1304 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■■■ 152.9
SCLT1-204ENST00000503215 TRIP11Q15643 1979 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 SMIM28A0A1B0GU29 152 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 I3L4J1 428 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 PLA2G4BP0C869 781 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 GUCY2CP25092 1073 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
SCLT1-204ENST00000503215 ARSHQ5FYA8 562 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 C15orf39Q6ZRI6 1047 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 CCDC149Q6ZUS6 474 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 TMEM130Q8N3G9 435 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 C3orf58Q8NDZ4 430 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 LNX1Q8TBB1 728 aaPredicted RBP17.85■□□□□ 0.45
SCLT1-204ENST00000503215 DRC1Q96MC2 740 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 ZMAT2Q96NC0 199 aaKnown RBP17.85■□□□□ 0.45
SCLT1-204ENST00000503215 TTPALQ9BTX7 342 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 MRPL4Q9BYD3 311 aaKnown RBP17.85■□□□□ 0.45
SCLT1-204ENST00000503215 SORCS3Q9UPU3 1222 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 PHLPP2Q6ZVD8 1323 aa17.85■□□□□ 0.45
SCLT1-204ENST00000503215 PROZP22891 400 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 GRM5P41594 1212 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 CLCNKBP51801 687 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 ZNF568Q3ZCX4 644 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 SEZ6Q53EL9 994 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 ARL6IP4Q66PJ3 421 aaKnown RBP17.84■□□□□ 0.45
SCLT1-204ENST00000503215 ALKAL1Q6UXT8 129 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 GPR65Q8IYL9 337 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 TMEM161BQ8NDZ6 487 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 PRSS33Q8NF86 280 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 SMG7Q92540 1137 aaKnown RBP17.84■□□□□ 0.45
SCLT1-204ENST00000503215 NTPCRQ9BSD7 190 aaKnown RBP17.84■□□□□ 0.45
SCLT1-204ENST00000503215 NT5C3AQ9H0P0 336 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCLT1-204ENST00000503215 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.84■□□□□ 0.45
SCLT1-204ENST00000503215 DENND4AQ7Z401 1863 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 DOCK6Q96HP0 2047 aa17.84■□□□□ 0.45
SCLT1-204ENST00000503215 B3GAT3O94766 335 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 HARSP12081 509 aaKnown RBP17.83■□□□□ 0.45
SCLT1-204ENST00000503215 PLS3P13797 630 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 NHLH1Q02575 133 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 MTMR3Q13615 1198 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 CUL4AQ13619 759 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 XKR4Q5GH76 650 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 RSPO2Q6UXX9 243 aaPredicted RBP17.83■□□□□ 0.45
SCLT1-204ENST00000503215 OTOP3Q7RTS5 596 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 PLCD3Q8N3E9 789 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 ST13P5Q8NFI4 369 aaPredicted RBP17.83■□□□□ 0.45
SCLT1-204ENST00000503215 PIK3R5Q8WYR1 880 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 MYADMQ96S97 322 aa17.83■□□□□ 0.45
SCLT1-204ENST00000503215 WDR6Q9NNW5 1121 aaKnown RBP17.83■□□□□ 0.45
SCLT1-204ENST00000503215 RBM19Q9Y4C8 960 aaKnown RBP17.83■□□□□ 0.45
SCLT1-204ENST00000503215 MAPTP10636 758 aaKnown RBP17.82■□□□□ 0.44
SCLT1-204ENST00000503215 BRCC3P46736 316 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 DHX8Q14562 1220 aaKnown RBP17.82■□□□□ 0.44
SCLT1-204ENST00000503215 PSMD5Q16401 504 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 UPP1Q16831 310 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 DCLRE1AQ6PJP8 1040 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 SUGP1Q8IWZ8 645 aaKnown RBP17.82■□□□□ 0.44
SCLT1-204ENST00000503215 UBALD2Q8IYN6 164 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 SPIRE2Q8WWL2 714 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 RSAD2Q8WXG1 361 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 C18orf25Q96B23 403 aaPredicted RBP17.82■□□□□ 0.44
SCLT1-204ENST00000503215 TCHPQ9BT92 498 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 CCDC94Q9BW85 323 aaPredicted RBP17.82■□□□□ 0.44
SCLT1-204ENST00000503215 HAPLN2Q9GZV7 340 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 PLEKHA4Q9H4M7 779 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 C17orf75Q9HAS0 396 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 BLOC1S4Q9NUP1 217 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 PIEZO1Q92508 2521 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 VWA8A3KMH1 1905 aa17.82■□□□□ 0.44
SCLT1-204ENST00000503215 PAPLNO95428 1278 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 MCF2P10911 925 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 FGFR3P22607 806 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 TKTP29401 623 aaKnown RBP17.81■□□□□ 0.44
SCLT1-204ENST00000503215 AVPR2P30518 371 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 SF3A1Q15459 793 aaKnown RBP17.81■□□□□ 0.44
SCLT1-204ENST00000503215 MPZL3Q6UWV2 235 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 HDAC7Q8WUI4 952 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 ACSF2Q96CM8 615 aaPredicted RBP17.81■□□□□ 0.44
SCLT1-204ENST00000503215 CDK5RAP3Q96JB5 506 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 SNX27Q96L92 541 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 PHOX2BQ99453 314 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 TIPINQ9BVW5 301 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 PRKD2Q9BZL6 878 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 KCNK12Q9HB15 430 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 CLUHO75153 1309 aa17.81■□□□□ 0.44
SCLT1-204ENST00000503215 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-204ENST00000503215 TMEM189-UBE2V1I3L0A0 370 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 ZMYND10O75800 440 aa17.8■□□□□ 0.44
SCLT1-204ENST00000503215 NTHL1P78549 312 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms