RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MARCH8Q5T0T0 291 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 TDRD10Q5VZ19 366 aaKnown RBP23.73■■□□□ 1.39
PTPN13-205ENST00000502971 U2AF1L4Q8WU68 220 aaKnown RBP23.73■■□□□ 1.39
PTPN13-205ENST00000502971 KAT5Q92993 513 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 AGPAT1Q99943 283 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 PACSIN1Q9BY11 444 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 SALL4Q9UJQ4 1053 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 CPSF3Q9UKF6 684 aaKnown RBP23.73■■□□□ 1.39
PTPN13-205ENST00000502971 SAR1BQ9Y6B6 198 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 ENC1O14682 589 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 ZEB2O60315 1214 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 TADA3O75528 432 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 F2P00734 622 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 H2AFZP0C0S5 128 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 FCGRTP55899 365 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 LACTBP83111 547 aaPredicted RBP23.73■■□□□ 1.39
PTPN13-205ENST00000502971 H2AFVQ71UI9 128 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 LRRN4CLQ8ND94 238 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 ANKRD7Q92527 254 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 MINDY3Q9H8M7 445 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 C1orf112Q9NSG2 853 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 EVPLQ92817 2033 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 A0A087WZ62 844 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 TBC1D8O95759 1140 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 HLA-DRAP01903 254 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 PIK3CAP42336 1068 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 NAP1L1P55209 391 aaKnown RBP23.72■■□□□ 1.39
PTPN13-205ENST00000502971 SP3Q02447 781 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 BIRC3Q13489 604 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 TMEM132AQ24JP5 1023 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 ZNF568Q3ZCX4 644 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 LMBRD2Q68DH5 695 aaPredicted RBP23.72■■□□□ 1.39
PTPN13-205ENST00000502971 SRGAP1Q7Z6B7 1085 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 WDR49Q8IV35 697 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 GLYCTKQ8IVS8 523 aa23.72■■□□□ 1.39
PTPN13-205ENST00000502971 ZNF668Q96K58 619 aaPredicted RBP23.72■■□□□ 1.39
PTPN13-205ENST00000502971 FDXACB1Q9BRP7 624 aaPredicted RBP23.72■■□□□ 1.39
PTPN13-205ENST00000502971 PTPRJQ12913 1337 aa23.71■■□□□ 1.39
PTPN13-205ENST00000502971 TNFSF9P41273 254 aa23.71■■□□□ 1.39
PTPN13-205ENST00000502971 CPT1AP50416 773 aa23.71■■□□□ 1.39
PTPN13-205ENST00000502971 NAA30Q147X3 362 aaPredicted RBP23.71■■□□□ 1.39
PTPN13-205ENST00000502971 IFI16Q16666 785 aaKnown RBP23.71■■□□□ 1.39
PTPN13-205ENST00000502971 ZNF410Q86VK4 478 aa23.71■■□□□ 1.39
PTPN13-205ENST00000502971 UBXN4Q92575 508 aa23.71■■□□□ 1.39
PTPN13-205ENST00000502971 TATDN2Q93075 761 aa23.71■■□□□ 1.39
PTPN13-205ENST00000502971 AP5M1Q9H0R1 490 aa23.71■■□□□ 1.39
PTPN13-205ENST00000502971 NRCAMQ92823 1304 aa23.71■■□□□ 1.39
PTPN13-205ENST00000502971 A0A0A6YYK5 440 aaPredicted RBP23.7■■□□□ 1.39
PTPN13-205ENST00000502971 B4GALT5O43286 388 aa23.7■■□□□ 1.39
PTPN13-205ENST00000502971 USP8P40818 1118 aa23.7■■□□□ 1.39
PTPN13-205ENST00000502971 SEZ6Q53EL9 994 aa23.7■■□□□ 1.39
PTPN13-205ENST00000502971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.7■■□□□ 1.39
PTPN13-205ENST00000502971 BUB1O43683 1085 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 VNN1O95497 513 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 VTNP04004 478 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 IQCF3P0C7M6 154 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 PRLRP16471 622 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 TUBB4BP68371 445 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 CDC42EP1Q00587 391 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 AMHR2Q16671 573 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 KIAA0319LQ8IZA0 1049 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 PI4K2AQ9BTU6 479 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.7■■□□□ 1.38
PTPN13-205ENST00000502971 PCDHGC5Q9Y5F6 944 aa23.7■■□□□ 1.38
PTPN13-205ENST00000502971 V9GYY5 206 aaPredicted RBP23.7■■□□□ 1.38
PTPN13-205ENST00000502971 SMIM10L2AP0DMW4 78 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 SMIM10L2BP0DMW5 78 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 PSMC4P43686 418 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 POU5F1Q01860 360 aaKnown RBP23.69■■□□□ 1.38
PTPN13-205ENST00000502971 NFRKBQ6P4R8 1299 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 NLRP7Q8WX94 980 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 KAT2BQ92831 832 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 CDT1Q9H211 546 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 SETD4Q9NVD3 440 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 HDAC6Q9UBN7 1215 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 TSKSQ9UJT2 592 aa23.69■■□□□ 1.38
PTPN13-205ENST00000502971 MCF2P10911 925 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 CTGFP29279 349 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 MFSD10Q14728 455 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 ELF2Q15723 593 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 ERCC6LQ2NKX8 1250 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 EEF1DP3Q658K8 133 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 ZNF710Q8N1W2 664 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 OR5B17Q8NGF7 314 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 EPS8L1Q8TE68 723 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 LMBR1Q8WVP7 490 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 GOLGA1Q92805 767 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 SNX12Q9UMY4 172 aa23.68■■□□□ 1.38
PTPN13-205ENST00000502971 CYP26A1O43174 497 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 PHACTR2O75167 634 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 SGPL1O95470 568 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 TMEM253P0C7T8 217 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 GALCP54803 685 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 CHMP4BP1P59074 171 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 KYAT1Q16773 422 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 DUOXA2Q1HG44 320 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 RSRC2Q7L4I2 434 aaKnown RBP23.67■■□□□ 1.38
PTPN13-205ENST00000502971 RPUSD2Q8IZ73 545 aaKnown RBP23.67■■□□□ 1.38
PTPN13-205ENST00000502971 SLC20A1Q8WUM9 679 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 SEPT11Q9NVA2 429 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms