RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 NELL1Q92832 810 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 KIFAP3Q92845 792 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 DDX27Q96GQ7 796 aaKnown RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 PPP1R10Q96QC0 940 aaKnown RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 IER2Q9BTL4 223 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 POLR3FQ9H1D9 316 aaPredicted RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 PDZD7Q9H5P4 517 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 C17orf75Q9HAS0 396 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 PIDD1Q9HB75 910 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 GJB4Q9NTQ9 266 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 GDE1Q9NZC3 331 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 MTRRQ9UBK8 725 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 SIT1Q9Y3P8 196 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 PTPRZ1P23471 2315 aaPredicted RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 ZFHX2Q9C0A1 2572 aaPredicted RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 VPS13AQ96RL7 3174 aa6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 RIF1Q5UIP0 2472 aaKnown RBP6.74□□□□□ -1.33
LSM3P4-201ENST00000502948 COL4A2P08572 1712 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 MYH11P35749 1972 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 KANSL1LA0AUZ9 987 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ARHGEF37A1IGU5 675 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 FAM205CA6NFA0 338 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 POTEMA6NI47 508 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 LRRIQ4A6NIV6 560 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 F8W810 466 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 LAD1O00515 517 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 SYN3O14994 580 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 SPTLC1O15269 473 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 MED24O75448 989 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ECI2O75521 394 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 RECQL4O94761 1208 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ABLIM3O94929 683 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 KIF4AO95239 1232 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 C8AP07357 584 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 CFHP08603 1231 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ATP2B1P20020 1258 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 SCP2P22307 547 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 FSHRP23945 695 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 RPS9P46781 194 aaKnown RBP6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ID4P47928 161 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 SAFBQ15424 915 aaKnown RBP eCLIP6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 PSMD5Q16401 504 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 UPP1Q16831 310 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 PPM1LQ5SGD2 360 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 LIN9Q5TKA1 542 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 FAM171A1Q5VUB5 890 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ERICH6BQ5W0A0 696 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 SLC8B1Q6J4K2 584 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 PADI6Q6TGC4 694 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ALKAL1Q6UXT8 129 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ANKS3Q6ZW76 656 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 PALB2Q86YC2 1186 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ADSSL1Q8N142 457 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 IGSF22Q8N9C0 903 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 LEMD2Q8NC56 503 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 PJA1Q8NG27 643 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 ZNF461Q8TAF7 563 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 GPR152Q8TDT2 470 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 PIGOQ8TEQ8 1089 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 RSAD2Q8WXG1 361 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 DNASE1L2Q92874 299 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 FGF13Q92913 245 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 CLDN23Q96B33 292 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 LARP6Q9BRS8 491 aaKnown RBP6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 NTPCRQ9BSD7 190 aaKnown RBP6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 TIPINQ9BVW5 301 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 OXCT2Q9BYC2 517 aaPredicted RBP6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 FAM126AQ9BYI3 521 aaPredicted RBP6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 TMEM134Q9H6X4 195 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 TBC1D17Q9HA65 648 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 PTPRHQ9HD43 1115 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 TRPV5Q9NQA5 729 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 BMP2KQ9NSY1 1161 aaPredicted RBP6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 SLC38A7Q9NVC3 462 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 PARP2Q9UGN5 583 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 TNFSF13BQ9Y275 285 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 RBM19Q9Y4C8 960 aaKnown RBP6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 NUMBLQ9Y6R0 609 aa6.73□□□□□ -1.33
LSM3P4-201ENST00000502948 CACNA1IQ9P0X4 2223 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 WNT7AO00755 349 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 NCAM2O15394 837 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 TBC1D4O60343 1298 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 USO1O60763 962 aaKnown RBP6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 PRKCBP05771 671 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 OR52Z1P0C646 297 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 SP9P0CG40 484 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 ATF2P15336 505 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 KCNE1P15382 129 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 SDHBP21912 280 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 PROZP22891 400 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 PAX3P23760 479 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 RPL9P32969 192 aaKnown RBP6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 PRPHP41219 470 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 GRM5P41594 1212 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 HMGN5P82970 282 aaKnown RBP6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 MRPL58Q14197 206 aaKnown RBP6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 AXDND1Q5T1B0 1012 aaPredicted RBP6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 TPGS2Q68CL5 300 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 C1orf228Q6PIY5 440 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 PRSS55Q6UWB4 352 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms