RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 STX1BP61266 288 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 RAPH1Q70E73 1250 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 ERICH1Q86X53 443 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 PPM1NQ8N819 430 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 SLC10A4Q96EP9 437 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 AIPL1Q9NZN9 384 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 NEU2Q9Y3R4 380 aa18.24■□□□□ 0.51
HMGXB3-201ENST00000502717 CALB1P05937 261 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 COPB2P35606 906 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 PBX1P40424 430 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 KDSRQ06136 332 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 P3H1Q32P28 736 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 BZW1Q7L1Q6 419 aaKnown RBP18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 SLC13A5Q86YT5 568 aaPredicted RBP18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 DCAF4Q8WV16 495 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 NSUN4Q96CB9 384 aaKnown RBP18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 MASTLQ96GX5 879 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 TLR3O15455 904 aaKnown RBP18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 HESX1Q9UBX0 185 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 UBTFL6P0CB48 400 aaPredicted RBP18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 SAT1P21673 171 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 PSMA2P25787 234 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 PTENP60484 403 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 RCN1Q15293 331 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 PKN1Q16512 942 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 RNF34Q969K3 372 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 DUSP9Q99956 384 aaKnown RBP18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 MKNK1Q9BUB5 465 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 TLK1Q9UKI8 766 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 APOEP02649 317 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 PEX3P56589 373 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 TMEM35BQ8NCS4 154 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 FAM217BQ9NTX9 383 aaPredicted RBP18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 NDUFA13Q9P0J0 144 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 DCCP43146 1447 aa18.23■□□□□ 0.51
HMGXB3-201ENST00000502717 B2RBV5 119 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 KRT3P12035 628 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 HOXA13P31271 388 aaPredicted RBP18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 PPP2R5CQ13362 524 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 LAMB3Q13751 1172 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 TFDP2Q14188 446 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 PADI6Q6TGC4 694 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 ZNF507Q8TCN5 953 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 SH3GL2Q99962 352 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 ZSWIM1Q9BR11 485 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 ZWILCHQ9H900 591 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 MRPL40Q9NQ50 206 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 USP17L10C9JJH3 530 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 SEC23AQ15436 765 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 SESTD1Q86VW0 696 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 FAM84BQ96KN1 310 aaPredicted RBP18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 PFDN4Q9NQP4 134 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 DDX56Q9NY93 547 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 CCPG1Q9ULG6 757 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 MCF2P10911 925 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 CYLC2Q14093 348 aaPredicted RBP18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 WASHC2DQ5SRD0 308 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 WDR59Q6PJI9 974 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 ALG13Q9NP73 1137 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 SEPT10Q9P0V9 454 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 TRIM33Q9UPN9 1127 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 WDR64B1ANS9 1081 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 CYP26A1O43174 497 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 GRB10Q13322 594 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 LVRNQ6Q4G3 990 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 ADGRF4Q8IZF3 695 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 RPS6KC1Q96S38 1066 aa18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 G3BP2Q9UN86 482 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-201ENST00000502717 KCNQ2O43526 872 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 PRPSAP2O60256 369 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 CENPCQ03188 943 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 CEP170P1Q96L14 293 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 REEP2Q9BRK0 252 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 MCM8Q9UJA3 840 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 RIMS1Q86UR5 1692 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 CAPN9O14815 690 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 HSPA8P11142 646 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 SERPINB3P29508 390 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 C18orf8Q96DM3 657 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 OSBPL8Q9BZF1 889 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 XAB2Q9HCS7 855 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 IL1RAPL1Q9NZN1 696 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 WHRNQ9P202 907 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 PAIP2BQ9ULR5 123 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 SMARCA1P28370 1054 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 CYP4F11Q9HBI6 524 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 KIAA1586Q9HCI6 787 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 RNF181Q9P0P0 153 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 ESYT2A0FGR8 921 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 PON1P27169 355 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 TEDDM1Q5T9Z0 273 aa18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 ARHGEF1Q92888 912 aaKnown RBP18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 LBHD1Q9BQE6 289 aaPredicted RBP18.21■□□□□ 0.51
HMGXB3-201ENST00000502717 NMT1P30419 496 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 YARSP54577 528 aaKnown RBP18.2■□□□□ 0.5
HMGXB3-201ENST00000502717 NLRP9Q7RTR0 991 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms