RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 MAF1Q9H063 256 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 ACAD9Q9H845 621 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 C1orf112Q9NSG2 853 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 BCCIPQ9P287 314 aaKnown RBP eCLIP17.77■□□□□ 0.44
VCAN-204ENST00000502527 SNX24Q9Y343 169 aa17.77■□□□□ 0.44
VCAN-204ENST00000502527 EXTL3O43909 919 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 GRIN3BO60391 1043 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 PLTPP55058 493 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 SP4Q02446 784 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 CYP1B1Q16678 543 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 KRT71Q3SY84 523 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 ODF2Q5BJF6 829 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 BTBD6Q96KE9 485 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 PLVAPQ9BX97 442 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 CNOT8Q9UFF9 292 aaKnown RBP17.76■□□□□ 0.43
VCAN-204ENST00000502527 SCP2P22307 547 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 LIG4P49917 911 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 PMS2P54278 862 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 CCDC137Q6PK04 289 aaKnown RBP17.76■□□□□ 0.43
VCAN-204ENST00000502527 C15orf39Q6ZRI6 1047 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 TAS1R3Q7RTX0 852 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 SPATS2Q86XZ4 545 aaKnown RBP17.76■□□□□ 0.43
VCAN-204ENST00000502527 A1CFQ9NQ94 594 aaKnown RBP17.76■□□□□ 0.43
VCAN-204ENST00000502527 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 FAM169AQ9Y6X4 670 aa17.76■□□□□ 0.43
VCAN-204ENST00000502527 SUPT20HL2P0C7V6 817 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 BPIFB4P59827 614 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 CLDN10P78369 228 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 STRN3Q13033 797 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 SUPT20HL1Q3ZLR7 823 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 WDR44Q5JSH3 913 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 ZDHHC24Q6UX98 284 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 HOOK3Q86VS8 718 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 ZNF677Q86XU0 584 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 ZDHHC14Q8IZN3 488 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 PI4K2AQ9BTU6 479 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 PABPC3Q9H361 631 aaKnown RBP17.75■□□□□ 0.43
VCAN-204ENST00000502527 MTRF1LQ9UGC7 380 aaKnown RBP17.75■□□□□ 0.43
VCAN-204ENST00000502527 DOCK1Q14185 1865 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 NUDT17P0C025 328 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 COILP38432 576 aaPredicted RBP17.75■□□□□ 0.43
VCAN-204ENST00000502527 FNTAP49354 379 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 PPP2R2AP63151 447 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 PSMD6Q15008 389 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 MTERF2Q49AM1 385 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 TTC27Q6P3X3 843 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 CATSPERGQ6ZRH7 1159 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 CCDC105Q8IYK2 499 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 FBXO25Q8TCJ0 367 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 TRIM11Q96F44 468 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 FNBP1Q96RU3 617 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 GRHL1Q9NZI5 618 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 SLC12A6Q9UHW9 1150 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 NOVA2Q9UNW9 492 aaKnown RBP17.75■□□□□ 0.43
VCAN-204ENST00000502527 TELO2Q9Y4R8 837 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 PCDHB2Q9Y5E7 798 aa17.75■□□□□ 0.43
VCAN-204ENST00000502527 ANKRD65E5RJM6 399 aa17.74■□□□□ 0.43
VCAN-204ENST00000502527 MYBL1P10243 752 aa17.74■□□□□ 0.43
VCAN-204ENST00000502527 MAPK4P31152 587 aa17.74■□□□□ 0.43
VCAN-204ENST00000502527 POLGP54098 1239 aaPredicted RBP17.74■□□□□ 0.43
VCAN-204ENST00000502527 EMC2Q15006 297 aa17.74■□□□□ 0.43
VCAN-204ENST00000502527 NLRP14Q86W24 1093 aa17.74■□□□□ 0.43
VCAN-204ENST00000502527 PPM1EQ8WY54 764 aa17.74■□□□□ 0.43
VCAN-204ENST00000502527 AVENQ9NQS1 362 aaPredicted RBP17.74■□□□□ 0.43
VCAN-204ENST00000502527 HOXC10Q9NYD6 342 aa17.74■□□□□ 0.43
VCAN-204ENST00000502527 PARP14Q460N5 1801 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 A0A087WUV0 522 aaPredicted RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 RARAP10276 462 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 UNGP13051 313 aaPredicted RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 RPL21P46778 160 aaKnown RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 DENND2CQ68D51 928 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 APOBEC3FQ8IUX4 373 aaKnown RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 C12orf50Q8NA57 414 aaPredicted RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 PSPC1Q8WXF1 523 aaKnown RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 ZNF516Q92618 1163 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 KCNN1Q92952 543 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 ELMO3Q96BJ8 720 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 CCT8L2Q96SF2 557 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 FAM129AQ9BZQ8 928 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 STYXL1Q9Y6J8 313 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 TCRBV7S2A1N4TA0A589 114 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 TNNI1P19237 187 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 MAGOHP61326 146 aaKnown RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 SLC20A2Q08357 652 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 SIX1Q15475 284 aaPredicted RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 ZACNQ401N2 412 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 POTEAQ6S8J7 498 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 CPNE8Q86YQ8 564 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 MCOLN2Q8IZK6 566 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 ZNF473Q8WTR7 871 aaKnown RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 PAGR1Q9BTK6 254 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 AGO2Q9UKV8 859 aaKnown RBP17.73■□□□□ 0.43
VCAN-204ENST00000502527 PASKQ96RG2 1323 aa17.73■□□□□ 0.43
VCAN-204ENST00000502527 SORBS3O60504 671 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 FAM107AO95990 144 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 CDR1P51861 262 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 SLFN12LQ6IEE8 588 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 MICALCLQ6ZW33 695 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms