RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	USP38	Q8NB14	1042 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	TCHP	Q9BT92	498 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	EIF2A	Q9BY44	585 aa	Known RBP	13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	TTYH3	Q9C0H2	523 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	ST3GAL5	Q9UNP4	418 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	P4HA2	O15460	535 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	CLTA	P09496	248 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	STAG3L1	P0CL83	205 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	GHR	P10912	638 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	HARS	P12081	509 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	SELP	P16109	830 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	GTF2H1	P32780	548 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	MATR3	P43243	847 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	1e-6	■■■□□ 16
MATR3-231	ENST00000502394	FAAP100	Q0VG06	881 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	GPNMB	Q14956	572 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	SYCP1	Q15431	976 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	CBWD6	Q4V339	395 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	CBWD3	Q5JTY5	395 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	CBWD5	Q5RIA9	395 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	FKBP15	Q5T1M5	1219 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	SPECC1L	Q69YQ0	1117 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	C15orf39	Q6ZRI6	1047 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	TMC6	Q7Z403	805 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	CGRRF1	Q99675	332 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	ADPGK	Q9BRR6	497 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	TRAIP	Q9BWF2	469 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	C11orf49	Q9H6J7	331 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	CHST12	Q9NRB3	414 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	RBAK	Q9NYW8	714 aa	Predicted RBP	13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	IMPACT	Q9P2X3	320 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	PIN4	Q9Y237	131 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	COQ4	Q9Y3A0	265 aa		13.19	□□□□□ -0.3
MATR3-231	ENST00000502394	PTPRJ	Q12913	1337 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TTC26	A0AVF1	554 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	GPR182	O15218	404 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TLR3	O15455	904 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	EVI5	O60447	810 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	NPTXR	O95502	500 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	CD52	P31358	61 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	KLK7	P49862	253 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TLE2	Q04725	743 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	NCBP1	Q09161	790 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	BFSP2	Q13515	415 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TMEM132A	Q24JP5	1023 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TRIM60	Q495X7	471 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	EPC2	Q52LR7	807 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	FIGN	Q5HY92	759 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TCERG1L	Q5VWI1	586 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	LRRC8D	Q7L1W4	858 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	THNSL1	Q8IYQ7	743 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	SPC24	Q8NBT2	197 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	LMO3	Q8TAP4	145 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	ZNF516	Q92618	1163 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	PAWR	Q96IZ0	340 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TMEM117	Q9H0C3	514 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TMX1	Q9H3N1	280 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TMEM8A	Q9HCN3	771 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	PDE11A	Q9HCR9	933 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	TBX21	Q9UL17	535 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	PADI3	Q9ULW8	664 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	DNAH12	Q6ZR08	3092 aa		13.18	□□□□□ -0.3
MATR3-231	ENST00000502394	ANK1	P16157	1881 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	PES1	O00541	588 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	STX10	O60499	249 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	MGEA5	O60502	916 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	PQBP1	O60828	265 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	N4BP1	O75113	896 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	NOL4	O94818	638 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	C4BPA	P04003	597 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	GYPC	P04921	128 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	CXCL8	P10145	99 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	PBX2	P40425	430 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	SURF1	Q15526	300 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	LRRC26	Q2I0M4	334 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	SLC10A6	Q3KNW5	377 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	USP37	Q86T82	979 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	EFCAB13	Q8IY85	973 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	SMG8	Q8ND04	991 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	CCDC127	Q96BQ5	260 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	POP1	Q99575	1024 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	GAN	Q9H2C0	597 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	RPF1	Q9H9Y2	349 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	SIX2	Q9NPC8	291 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	PLCB1	Q9NQ66	1216 aa		13.17	□□□□□ -0.3
MATR3-231	ENST00000502394	RALGAPA2	Q2PPJ7	1873 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	TANC1	Q9C0D5	1861 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	UMODL1	Q5DID0	1318 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	DCDC2C	A8MYV0	355 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	EPHB6	O15197	1021 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	NBN	O60934	754 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	IL18RAP	O95256	599 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	DLAT	P10515	647 aa	Known RBP	13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	PON1	P27169	355 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	GCLM	P48507	274 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	MXI1	P50539	228 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	MYL7	Q01449	175 aa		13.16	□□□□□ -0.3
MATR3-231	ENST00000502394	PAK2	Q13177	524 aa		13.16	□□□□□ -0.3

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