RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	ECM1	Q16610	540 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	LLGL2	Q6P1M3	1020 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	AGMO	Q6ZNB7	445 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	ADGRD2	Q7Z7M1	963 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	SLC39A11	Q8N1S5	342 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	BSND	Q8WZ55	320 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	NECAB3	Q96P71	396 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	CDCA3	Q99618	268 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	TIPIN	Q9BVW5	301 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	NGRN	Q9NPE2	291 aa	Known RBP	11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	KMT5A	Q9NQR1	393 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	CD207	Q9UJ71	328 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	HES2	Q9Y543	173 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810		K7ERI5	159 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	PER2	O15055	1255 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	LINC01565	O15544	149 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	SYT1	P21579	422 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	AKAP5	P24588	427 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	HOXA11	P31270	313 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	LONP1	P36776	959 aa	Known RBP	11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	MATR3	P43243	847 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	SCNN1G	P51170	649 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	SMTN	P53814	917 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	STRN3	Q13033	797 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	ARID5B	Q14865	1188 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	IL17A	Q16552	155 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	DCAF4L1	Q3SXM0	396 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	UBXN11	Q5T124	520 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	CUL9	Q8IWT3	2517 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	VPS52	Q8N1B4	723 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	EFHB	Q8N7U6	833 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	BICD1	Q96G01	975 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	GAD1	Q99259	594 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	RUSC1	Q9BVN2	902 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	ZHX3	Q9H4I2	956 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	NRDE2	Q9H7Z3	1164 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	POLD4	Q9HCU8	107 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	DNAJB4	Q9UDY4	337 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	STK39	Q9UEW8	545 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	CCDC39	Q9UFE4	941 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	FAN1	Q9Y2M0	1017 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	GIT1	Q9Y2X7	761 aa		11.73	□□□□□ -0.53
CDK11A-222	ENST00000498810	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	ARL5C	A6NH57	179 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	STX6	O43752	255 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	TBX10	O75333	385 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	TBCA	O75347	108 aa	Known RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	PLA2G4B	P0C869	781 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	HARS	P12081	509 aa	Known RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	IL9	P15248	144 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	SLC11A1	P49279	550 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	ERVFC1	P60507	584 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	GRIK3	Q13003	919 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	SMAD4	Q13485	552 aa	Known RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	CAMK1	Q14012	370 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	ZNF568	Q3ZCX4	644 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	ATF7IP2	Q5U623	682 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	RINT1	Q6NUQ1	792 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	MRPL10	Q7Z7H8	261 aa	Known RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	KCTD17	Q8N5Z5	321 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	SMG8	Q8ND04	991 aa	Known RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	IGSF21	Q96ID5	467 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	ZFP42	Q96MM3	310 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	TMEM175	Q9BSA9	504 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	TCHP	Q9BT92	498 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	MRPL4	Q9BYD3	311 aa	Known RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	PDZD7	Q9H5P4	517 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	KCND2	Q9NZV8	630 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	KLK14	Q9P0G3	267 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	KCNG1	Q9UIX4	513 aa		11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK11A-222	ENST00000498810		A0A1B0GUA9	196 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810		H0YCG3	227 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	ACKR2	O00590	384 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	SLC16A4	O15374	487 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	SLC26A4	O43511	780 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	FAM13A	O94988	1023 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	ALDH2	P05091	517 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	UROD	P06132	367 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	GALT	P07902	379 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	MARCKS	P29966	332 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	NPTX2	P47972	431 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	YARS	P54577	528 aa	Known RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	WDR4	P57081	412 aa	Known RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	GIT2	Q14161	759 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	KARS	Q15046	597 aa	Known RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	STK38	Q15208	465 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	DUSP6	Q16828	381 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	FAM187B	Q17R55	369 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	KIAA1841	Q6NSI8	718 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	GPBP1	Q86WP2	473 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	ZNF280B	Q86YH2	543 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	POP1	Q99575	1024 aa	Known RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms