RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 ITGA4P13612 1032 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 RPL13P26373 211 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 PSMC2P35998 433 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 MCCD1P59942 119 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 CYP24A1Q07973 514 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 FAM117BQ6P1L5 589 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 APTXQ7Z2E3 356 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 BRSK2Q8IWQ3 736 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 FAM186BQ8IYM0 893 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 CEP63Q96MT8 703 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 ACAP3Q96P50 834 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 GAD1Q99259 594 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 TRIM6Q9C030 488 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 NAT10Q9H0A0 1025 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 C1orf112Q9NSG2 853 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 HCSTQ9UBK5 93 aa11.75□□□□□ -0.53
GPATCH4-210ENST00000498756 LRRIQ3A6PVS8 624 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 B4GALT3O60512 393 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 LRRN2O75325 713 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 TRIM49P0CI25 452 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 TRIM49CP0CI26 452 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 GUCY2FP51841 1108 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 NAB2Q15742 525 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 TPD52L1Q16890 204 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 XKR4Q5GH76 650 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 GLRA4Q5JXX5 417 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 RASIP1Q5U651 963 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 CREBRFQ8IUR6 639 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 TRIM59Q8IWR1 403 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 EFCAB13Q8IY85 973 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 OR5B17Q8NGF7 314 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 HELQQ8TDG4 1101 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 PARD3BQ8TEW8 1205 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 HERVK_113Q902F9 699 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 TOP1MTQ969P6 601 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 C18orf25Q96B23 403 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 CCDC127Q96BQ5 260 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 SNX27Q96L92 541 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 CNOT6LQ96LI5 555 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 FAM161BQ96MY7 647 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 CASD1Q96PB1 797 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 CCDC94Q9BW85 323 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 THAP9Q9H5L6 903 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 RPF1Q9H9Y2 349 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 MTMR10Q9NXD2 777 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 RBAKQ9NYW8 714 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 CACNG4Q9UBN1 327 aa11.74□□□□□ -0.53
GPATCH4-210ENST00000498756 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 SMIM28A0A1B0GU29 152 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 ARL5CA6NH57 179 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 ZBBXA8MT70 800 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 SMTNL1A8MU46 457 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 KCNJ18B7U540 433 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 KIAA0391O15091 583 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 SLC16A3O15427 465 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 EOMESO95936 686 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 POMCP01189 267 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 PFKMP08237 780 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 NFICP08651 508 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 MLH1P40692 756 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 RAB27AP51159 221 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 SCNN1GP51170 649 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 MARSP56192 900 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 SMAD3P84022 425 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 SOX4Q06945 474 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 PSMD6Q15008 389 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 KRT31Q15323 416 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 ZBTB6Q15916 424 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 PTPN21Q16825 1174 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 CCDC40Q4G0X9 1142 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 FAM109BQ6ICB4 259 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 JADE1Q6IE81 842 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 FRMD5Q7Z6J6 570 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 MKNK1Q9BUB5 465 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 ELAC1Q9H777 363 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 RSAD1Q9HA92 442 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 KIAA1586Q9HCI6 787 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 TMEM161AQ9NX61 479 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 TAB2Q9NYJ8 693 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 FRMD4BQ9Y2L6 1034 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 GIT1Q9Y2X7 761 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 PCDHB7Q9Y5E2 793 aa11.73□□□□□ -0.53
GPATCH4-210ENST00000498756 TTC3P53804 2025 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 COL4A6Q14031 1691 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 BECN2A8MW95 431 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 GRXCR1A8MXD5 290 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 MAPK13O15264 365 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 DGKIO75912 1065 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 DDHD2O94830 711 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 CAVIN2O95810 425 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 DLATP10515 647 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 EPB41P11171 864 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 VAMP7P51809 220 aa11.72□□□□□ -0.53
GPATCH4-210ENST00000498756 CLDN10P78369 228 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms