RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 JMJD4Q9H9V9 463 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 ZBTB21Q9ULJ3 1066 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 USTQ9Y2C2 406 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 TMX2Q9Y320 296 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 PCDHA11Q9Y5I1 949 aa5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 MORC2Q9Y6X9 1032 aaPredicted RBP5.99□□□□□ -1.45
HMGXB4-208ENST00000498325 XIRP2A4UGR9 3374 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 MUC6Q6W4X9 2439 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 SYCE3A1L190 88 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 OR14I1A6ND48 311 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 SLC22A31A6NKX4 558 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 TMEM232C9JQI7 657 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 ZBTB5O15062 677 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 PLA2G6O60733 806 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 KRT37O76014 449 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 NDUFB10O96000 172 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 COL6A1P12109 1028 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 ATP2B1P20020 1258 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 GALK1P51570 392 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 SRSF3P84103 164 aaKnown RBP5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 FAM160A1Q05DH4 1040 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 PTPAQ15257 358 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 CCDC85BQ15834 202 aaPredicted RBP5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 TTC38Q5R3I4 469 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 WWC2Q6AWC2 1192 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 BTNL9Q6UXG8 535 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 PIK3AP1Q6ZUJ8 805 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 FAM160B2Q86V87 743 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 MRPL41Q8IXM3 137 aaKnown RBP5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 FSIP1Q8NA03 581 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 PPP1R13LQ8WUF5 828 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 ANP32BQ92688 251 aaKnown RBP5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 FERMT2Q96AC1 680 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 MTMR8Q96EF0 704 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 CCDC34Q96HJ3 373 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 TEPSINQ96N21 525 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 FTOQ9C0B1 505 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 TNMDQ9H2S6 317 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 TSPY26PQ9H489 355 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 CLSTN2Q9H4D0 955 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 AS3MTQ9HBK9 375 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 DACT1Q9NYF0 836 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 PCDHA6Q9UN73 950 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 PCDHA8Q9Y5H6 950 aa5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 SRPRBQ9Y5M8 271 aaKnown RBP5.98□□□□□ -1.45
HMGXB4-208ENST00000498325 ADAMTS20P59510 1910 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 FSD2A1L4K1 749 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 LAD1O00515 517 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 PSPNO60542 156 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 CCDC192P0DO97 292 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 CETPP11597 493 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 MARCKSP29966 332 aaPredicted RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 SLC16A2P36021 539 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 TOB1P50616 345 aaPredicted RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 KCNQ1P51787 676 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 ADCY7P51828 1080 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 STAT2P52630 851 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 USP14P54578 494 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 DUSP4Q13115 394 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 ORC2Q13416 577 aaPredicted RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 DSC3Q14574 896 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 RRP1BQ14684 758 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 NONOQ15233 471 aaKnown RBP eCLIP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 ZNF174Q15697 407 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 NPY5RQ15761 445 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 ENOX2Q16206 610 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 SLC35G1Q2M3R5 365 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 GLIPR1L2Q4G1C9 344 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 ADGRF1Q5T601 910 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 SYDE2Q5VT97 1194 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 TTBK2Q6IQ55 1244 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 SASS6Q6UVJ0 657 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 TEX2Q8IWB9 1127 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 REXO1Q8N1G1 1221 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 ANKS4BQ8N8V4 417 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 CUL5Q93034 780 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 COA7Q96BR5 231 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 TIGD1Q96MW7 591 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 NAP1L4Q99733 375 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 LBHD1Q9BQE6 289 aaPredicted RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 SDF4Q9BRK5 362 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 PYM1Q9BRP8 204 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 AMNQ9BXJ7 453 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 CPVLQ9H3G5 476 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 VCPKMTQ9H867 229 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 GRPEL1Q9HAV7 217 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 ZCCHC17Q9NP64 241 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 RIC8AQ9NPQ8 531 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 SIRT5Q9NXA8 310 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 TJP2Q9UDY2 1190 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 MBD1Q9UIS9 605 aaPredicted RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 HOOK1Q9UJC3 728 aaKnown RBP5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 ZNF112Q9UJU3 913 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 FEM1BQ9UK73 627 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 KCNH3Q9ULD8 1083 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 PCDHB6Q9Y5E3 794 aa5.97□□□□□ -1.45
HMGXB4-208ENST00000498325 FAM237AA0A1B0GTK4 181 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 A0A1B0GVL5 298 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 A0A1W2PRG0 241 aa5.96□□□□□ -1.46
HMGXB4-208ENST00000498325 PDHXO00330 501 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms