RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 IPO5O00410 1097 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZW10O43264 779 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 HS6ST1O60243 411 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ARHGEF15O94989 841 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SNUPNO95149 360 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 MTHFD1P11586 935 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 CD72P21854 359 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CTSOP43234 321 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 USP5P45974 858 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TKTL1P51854 596 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 HMGA2P52926 109 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ANTXR2P58335 489 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 MADCAM1Q13477 382 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 MAP7Q14244 749 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TAF1BQ53T94 588 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 JAKMIP3Q5VZ66 844 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 BRAT1Q6PJG6 821 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CHSY3Q70JA7 882 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TRAPPC11Q7Z392 1133 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SYVN1Q86TM6 617 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CHD1LQ86WJ1 897 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SHCBP1Q8NEM2 672 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 OR14K1Q8NGZ2 314 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 BTN2A2Q8WVV5 523 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PABPC5Q96DU9 382 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 IQCDQ96DY2 449 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 FOXP3Q9BZS1 431 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 NMUR2Q9GZQ4 415 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 LDAHQ9H6V9 325 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CDYLQ9Y232 598 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZNF652Q9Y2D9 606 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SPTA1P02549 2419 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CACNA1EQ15878 2313 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ABCA2Q9BZC7 2435 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PRAMEF25A6NGN4 478 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 FOXD2O60548 495 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 SCAF4O95104 1147 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 CD1AP06126 327 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ENDOUP21128 410 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 BMP5P22003 454 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PCK1P35558 622 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ID1P41134 155 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ECI1P42126 302 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TPMTP51580 245 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CLCN2P51788 898 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SNX16P57768 344 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 XRCC4Q13426 336 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PPIGQ13427 754 aaKnown RBP eCLIP1.58□□□□□ -2.167e-6■■□□□ 12.3
XRN1-214ENST00000498077 STILQ15468 1287 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 IFI16Q16666 785 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 CA9Q16790 459 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLC4A8Q2Y0W8 1093 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PLEKHG6Q3KR16 790 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SOGA3Q5TF21 947 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 DCAF15Q66K64 600 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 GRAMD4Q6IC98 578 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 LAYNQ6UX15 382 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 XKR5Q6UX68 686 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 LRRC69Q6ZNQ3 347 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 QSOX2Q6ZRP7 698 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SHISA6Q6ZSJ9 500 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 DZIP1Q86YF9 867 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 MCF2L2Q86YR7 1114 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZNF276Q8N554 614 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 EFHBQ8N7U6 833 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TDRD5Q8NAT2 981 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 SCCPDHQ8NBX0 429 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PRSS3P2Q8NHM4 247 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PIP4K2CQ8TBX8 421 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TBC1D15Q8TC07 691 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 INPP5DQ92835 1189 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 LENG9Q96B70 501 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 GLT1D1Q96MS3 346 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 KCNC2Q96PR1 638 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZCCHC2Q9C0B9 1178 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 PTGES2Q9H7Z7 377 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 GDPD2Q9HCC8 539 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 OSGEPQ9NPF4 335 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 DNMT3LQ9UJW3 386 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SERPINA10Q9UK55 444 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SNX14Q9Y5W7 946 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 NHSQ6T4R5 1651 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 FASNP49327 2511 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 B2RBV5 119 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 J3QKU1 62 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SPTLC2O15270 562 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLC16A5O15375 505 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CDC40O60508 579 aaKnown RBP eCLIP1.58□□□□□ -2.16
XRN1-214ENST00000498077 USO1O60763 962 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 STAMBPO95630 424 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 BPNT1O95861 308 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 EPXP11678 715 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 POU3F3P20264 500 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 ELAVL4P26378 380 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 RPA1P27694 616 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 GUCY2FP51841 1108 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 RNASE9P60153 205 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 CDK17Q00537 523 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZBTB16Q05516 673 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 GRIN1Q05586 938 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms