RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-234	ENST00000497758	PPP1R37	O75864	691 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	MYB	P10242	640 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	NRIP1	P48552	1158 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	CUL4B	Q13620	913 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	SEZ6	Q53EL9	994 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	FAM26F	Q5R3K3	315 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	UNC13D	Q70J99	1090 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	RBM23	Q86U06	439 aa	Known RBP	12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	TMEM206	Q9H813	350 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	CHMP5	Q9NZZ3	219 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	PCDHGC5	Q9Y5F6	944 aa		12.81	□□□□□ -0.36
MRPL55-234	ENST00000497758	TCHH	Q07283	1943 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	FAM237A	A0A1B0GTK4	181 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	SMIM28	A0A1B0GU29	152 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	PVALEF	A0A1B0GWK0	134 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	ANKRD63	C9JTQ0	380 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	TADA2A	O75478	443 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	PRPF6	O94906	941 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	CXCL14	O95715	111 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	MYL1	P05976	194 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	CXCL8	P10145	99 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	CASP1	P29466	404 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	CASP5	P51878	434 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	PPP2R3A	Q06190	1150 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	KCNA1	Q09470	495 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	HYAL1	Q12794	435 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	POSTN	Q15063	836 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	SLC39A4	Q6P5W5	647 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	ADGRD2	Q7Z7M1	963 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	ATXN2L	Q8WWM7	1075 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	POMGNT1	Q8WZA1	660 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	RABGGTA	Q92696	567 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	HPS3	Q969F9	1004 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	CCDC47	Q96A33	483 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	PABPC5	Q96DU9	382 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	UROC1	Q96N76	676 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	PPP1R10	Q96QC0	940 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	STRA6	Q9BX79	667 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	HAPLN2	Q9GZV7	340 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	ZBP1	Q9H171	429 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	CXCL16	Q9H2A7	254 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	GOLPH3L	Q9H4A5	285 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	UBE2Z	Q9H832	354 aa	Predicted RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	RPF1	Q9H9Y2	349 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	PLEKHA5	Q9HAU0	1116 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	EXOC1	Q9NV70	894 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	MARCH5	Q9NX47	278 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	CLDND1	Q9NY35	253 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	CNTN3	Q9P232	1028 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	ADAM28	Q9UKQ2	775 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	AGO2	Q9UKV8	859 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	PLXNA4	Q9HCM2	1894 aa		12.8	□□□□□ -0.36
MRPL55-234	ENST00000497758	HIDE1	A8MVS5	230 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	TISP43	B9A030	160 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	PER2	O15055	1255 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	EIF3D	O15371	548 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	ZNF202	O95125	648 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	UROD	P06132	367 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	SRGAP2B	P0DMP2	458 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	CTSA	P10619	480 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	KCNE1	P15382	129 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	KCNA5	P22460	613 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	MRPS5	P82675	430 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	TFF2	Q03403	129 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	XKR4	Q5GH76	650 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	KIAA1841	Q6NSI8	718 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	ALKAL1	Q6UXT8	129 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	MRPL43	Q8N983	215 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	FAM212A	Q96EL1	285 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	CDCA3	Q99618	268 aa	Predicted RBP	12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	FGFBP2	Q9BYJ0	223 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	MRPL17	Q9NRX2	175 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	CACNG4	Q9UBN1	327 aa		12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	TDRD15	B5MCY1	1934 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
MRPL55-234	ENST00000497758	C2orf71	A6NGG8	1288 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758		F8W810	466 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	TULP1	O00294	542 aa	Predicted RBP	12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	KIF4A	O95239	1232 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	SOD2	P04179	222 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	TNFSF9	P41273	254 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	GLUD2	P49448	558 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	ACOT2	P49753	483 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	NDUFV1	P49821	464 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	ELAVL2	Q12926	359 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	NAB2	Q15742	525 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	ENOX2	Q16206	610 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	DUSP6	Q16828	381 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	SLC10A6	Q3KNW5	377 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	ZBTB41	Q5SVQ8	909 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	KANK3	Q6NY19	840 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	FUT10	Q6P4F1	479 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	KRBA2	Q6ZNG9	492 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	EFHB	Q8N7U6	833 aa		12.78	□□□□□ -0.36
MRPL55-234	ENST00000497758	GLIS3	Q8NEA6	775 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms