RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 SHDQ96IW2 340 aa24.06■■□□□ 1.44
CLIC4-204ENST00000497755 PDZD7Q9H5P4 517 aa24.06■■□□□ 1.44
CLIC4-204ENST00000497755 BRMS1Q9HCU9 246 aa24.06■■□□□ 1.44
CLIC4-204ENST00000497755 NOTCH4Q99466 2003 aa24.06■■□□□ 1.44
CLIC4-204ENST00000497755 CCL16O15467 120 aa24.05■■□□□ 1.44
CLIC4-204ENST00000497755 NEMFO60524 1076 aa24.05■■□□□ 1.44
CLIC4-204ENST00000497755 THP07101 528 aa24.05■■□□□ 1.44
CLIC4-204ENST00000497755 HOXA9P31269 272 aa24.05■■□□□ 1.44
CLIC4-204ENST00000497755 SNW1Q13573 536 aaKnown RBP24.05■■□□□ 1.44
CLIC4-204ENST00000497755 ZC3H14Q6PJT7 736 aaKnown RBP24.05■■□□□ 1.44
CLIC4-204ENST00000497755 CATSPER3Q86XQ3 398 aa24.05■■□□□ 1.44
CLIC4-204ENST00000497755 ITFG1Q8TB96 612 aa24.05■■□□□ 1.44
CLIC4-204ENST00000497755 USP20Q9Y2K6 914 aa24.05■■□□□ 1.44
CLIC4-204ENST00000497755 VWA8A3KMH1 1905 aa24.05■■□□□ 1.44
CLIC4-204ENST00000497755 IGFBP6P24592 240 aaPredicted RBP24.04■■□□□ 1.44
CLIC4-204ENST00000497755 NOSTRINQ8IVI9 506 aa24.04■■□□□ 1.44
CLIC4-204ENST00000497755 NECAB1Q8N987 351 aa24.04■■□□□ 1.44
CLIC4-204ENST00000497755 MCPH1Q8NEM0 835 aa24.04■■□□□ 1.44
CLIC4-204ENST00000497755 DDX23Q9BUQ8 820 aaKnown RBP24.04■■□□□ 1.44
CLIC4-204ENST00000497755 POLIQ9UNA4 740 aa24.04■■□□□ 1.44
CLIC4-204ENST00000497755 KANSL1LA0AUZ9 987 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 N4BP3O15049 544 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 RECQL4O94761 1208 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 ATP2B1P20020 1258 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 RAB33AQ14088 237 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 SLC44A4Q53GD3 710 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 AXDND1Q5T1B0 1012 aaPredicted RBP24.03■■□□□ 1.44
CLIC4-204ENST00000497755 MTSS1LQ765P7 747 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 ZBTB8OSQ8IWT0 167 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 DCLK2Q8N568 766 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 BSNDQ8WZ55 320 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 TMEM60Q9H2L4 133 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 MTF2Q9Y483 593 aaPredicted RBP24.03■■□□□ 1.44
CLIC4-204ENST00000497755 MIA3Q5JRA6 1907 aa24.03■■□□□ 1.44
CLIC4-204ENST00000497755 COL4A3Q01955 1670 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 XYLBO75191 536 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 MED24O75448 989 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 OR1D2P34982 312 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 ELAVL2Q12926 359 aaKnown RBP24.02■■□□□ 1.44
CLIC4-204ENST00000497755 PRPF4BQ13523 1007 aaKnown RBP24.02■■□□□ 1.44
CLIC4-204ENST00000497755 UVSSAQ2YD98 709 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 PDXDC1Q6P996 788 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 SUMF1Q8NBK3 374 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 SLC7A14Q8TBB6 771 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 RUBCNQ92622 972 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 C2orf40Q9H1Z8 148 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 TUFT1Q9NNX1 390 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 HCFC1R1Q9NWW0 138 aa24.02■■□□□ 1.44
CLIC4-204ENST00000497755 DNMT3BQ9UBC3 853 aaKnown RBP24.02■■□□□ 1.44
CLIC4-204ENST00000497755 ACKR2O00590 384 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 EDN1P05305 212 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 POU2F2P09086 479 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 FGFR3P22607 806 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 PRKCQQ04759 706 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 MLF2Q15773 248 aaPredicted RBP24.01■■□□□ 1.43
CLIC4-204ENST00000497755 MAPK6Q16659 721 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 ME3Q16798 604 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 EEF1DP3Q658K8 133 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 RSPO2Q6UXX9 243 aaPredicted RBP24.01■■□□□ 1.43
CLIC4-204ENST00000497755 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.01■■□□□ 1.43
CLIC4-204ENST00000497755 DIS3L2Q8IYB7 885 aaKnown RBP24.01■■□□□ 1.43
CLIC4-204ENST00000497755 NACC1Q96RE7 527 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 CCDC113Q9H0I3 377 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 TRIP11Q15643 1979 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 NCOR2Q9Y618 2525 aa24.01■■□□□ 1.43
CLIC4-204ENST00000497755 ANKRD1Q15327 319 aa24■■□□□ 1.43
CLIC4-204ENST00000497755 CD300LGQ6UXG3 332 aa24■■□□□ 1.43
CLIC4-204ENST00000497755 HINFPQ9BQA5 517 aa24■■□□□ 1.43
CLIC4-204ENST00000497755 KCNH3Q9ULD8 1083 aa24■■□□□ 1.43
CLIC4-204ENST00000497755 MED19A0JLT2 244 aaPredicted RBP23.99■■□□□ 1.43
CLIC4-204ENST00000497755 FAM170BA6NMN3 283 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 LARGE1O95461 756 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 PRKCBP05771 671 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 CYP11B2P19099 503 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 TMEM132AQ24JP5 1023 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 ZNF528Q3MIS6 628 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 PADI6Q6TGC4 694 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 DGLUCYQ7Z3D6 616 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 NPAS3Q8IXF0 933 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 NSUN7Q8NE18 718 aaKnown RBP23.99■■□□□ 1.43
CLIC4-204ENST00000497755 GTF3C6Q969F1 213 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 KXD1Q9BQD3 176 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 ADPGKQ9BRR6 497 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 POLR3CQ9BUI4 534 aaPredicted RBP23.99■■□□□ 1.43
CLIC4-204ENST00000497755 BCO2Q9BYV7 579 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 OSBPL6Q9BZF3 934 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 SPATA6Q9NWH7 488 aaPredicted RBP23.99■■□□□ 1.43
CLIC4-204ENST00000497755 MTRRQ9UBK8 725 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 GDAQ9Y2T3 454 aa23.99■■□□□ 1.43
CLIC4-204ENST00000497755 TMEM189-UBE2V1I3L0A0 370 aa23.98■■□□□ 1.43
CLIC4-204ENST00000497755 B3GAT3O94766 335 aa23.98■■□□□ 1.43
CLIC4-204ENST00000497755 LIG1P18858 919 aa23.98■■□□□ 1.43
CLIC4-204ENST00000497755 CD72P21854 359 aa23.98■■□□□ 1.43
CLIC4-204ENST00000497755 NAMPTP43490 491 aa23.98■■□□□ 1.43
CLIC4-204ENST00000497755 FOSBP53539 338 aa23.98■■□□□ 1.43
CLIC4-204ENST00000497755 UBXN2BQ14CS0 331 aa23.98■■□□□ 1.43
CLIC4-204ENST00000497755 PABPC1LQ4VXU2 614 aaKnown RBP23.98■■□□□ 1.43
CLIC4-204ENST00000497755 FBXO4Q9UKT5 387 aa23.98■■□□□ 1.43
CLIC4-204ENST00000497755 JAK2O60674 1132 aa23.97■■□□□ 1.43
CLIC4-204ENST00000497755 KINO60870 393 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms