RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 DNAJC28Q9NX36 388 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 MKS1Q9NXB0 559 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 TRPM5Q9NZQ8 1165 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 TRHDEQ9UKU6 1024 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 HDAC5Q9UQL6 1122 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 RNASET2O00584 256 aaKnown RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 XPOTO43592 962 aaKnown RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 MT-CO1P00395 513 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 CT47B1P0C2W7 299 aaPredicted RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 MTHFD2P13995 350 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 FLT3LGP49771 235 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 RNASE9P60153 205 aaKnown RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 KRTAP10-9P60411 292 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 MRPS9P82933 396 aaKnown RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 TAP1Q03518 808 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 FSTL1Q12841 308 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 KLF1Q13351 362 aaPredicted RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 PDCD4Q53EL6 469 aaKnown RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 FAM47AQ5JRC9 791 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 ZNF572Q7Z3I7 529 aaPredicted RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 TRMT2AQ8IZ69 625 aaKnown RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 BEND2Q8NDZ0 799 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 SLC35B2Q8TB61 432 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 ZNF480Q8WV37 535 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 RAX2Q96IS3 184 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 SERHL2Q9H4I8 314 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 ALG13Q9NP73 1137 aaKnown RBP4.36□□□□□ -1.71
PSPC1-205ENST00000497722 DPP7Q9UHL4 492 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 PNPLA7Q6ZV29 1317 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 PHLDB1Q86UU1 1377 aa4.36□□□□□ -1.71
PSPC1-205ENST00000497722 KRTAP29-1A8MX34 341 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 CXorf49A8MYA2 514 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 PJA2O43164 708 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 B3GALT2O43825 422 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 PHF2O75151 1096 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 RHOBTB3O94955 611 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 S100BP04271 92 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 HMGB1P09429 215 aaKnown RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 RBP3P10745 1247 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 ALOX15P16050 662 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 POU3F3P20264 500 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 RGS19P49795 217 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 CCT2P78371 535 aaKnown RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 CDK17Q00537 523 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 PPP3CAQ08209 521 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 MTMR1Q13613 665 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 ADRM1Q16186 407 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 PTPN21Q16825 1174 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 ABCB5Q2M3G0 1257 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 MUM1Q2TAK8 710 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 TOR2AQ5JU69 321 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 SYDE2Q5VT97 1194 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 FAM180AQ6UWF9 173 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 ZBTB46Q86UZ6 589 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 PRIMA1Q86XR5 153 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 PLXDC1Q8IUK5 500 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 REPS2Q8NFH8 660 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 GPR156Q8NFN8 814 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 AUTS2Q8WXX7 1259 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 RIN2Q8WYP3 895 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 LINC00476Q8WZB0 136 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 CCDC8Q9H0W5 538 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 BCO1Q9HAY6 547 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 SPON1Q9HCB6 807 aa4.35□□□□□ -1.71
PSPC1-205ENST00000497722 DDX56Q9NY93 547 aaKnown RBP4.35□□□□□ -1.71
PSPC1-205ENST00000497722 DRGXA6NNA5 263 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 SNUPNO95149 360 aaKnown RBP4.34□□□□□ -1.71
PSPC1-205ENST00000497722 FBLP22087 321 aaKnown RBP4.34□□□□□ -1.71
PSPC1-205ENST00000497722 MGAT1P26572 445 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 IL12RB1P42701 662 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 EXOSC10Q01780 885 aaKnown RBP4.34□□□□□ -1.71
PSPC1-205ENST00000497722 SCAPQ12770 1279 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 BRDTQ58F21 947 aaPredicted RBP4.34□□□□□ -1.71
PSPC1-205ENST00000497722 HECTD2Q5U5R9 776 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 AGAP9Q5VTM2 703 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 EFCAB12Q6NXP0 572 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 PDZD4Q76G19 769 aaPredicted RBP4.34□□□□□ -1.71
PSPC1-205ENST00000497722 RNF169Q8NCN4 708 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 OR7D4Q8NG98 312 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 NTN5Q8WTR8 489 aaPredicted RBP4.34□□□□□ -1.71
PSPC1-205ENST00000497722 TFAP2CQ92754 450 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 FUBP1Q96AE4 644 aaKnown RBP4.34□□□□□ -1.71
PSPC1-205ENST00000497722 WDR11Q9BZH6 1224 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 AASDHPPTQ9NRN7 309 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 ANKFY1Q9P2R3 1169 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 EPN1Q9Y6I3 576 aaPredicted RBP4.34□□□□□ -1.71
PSPC1-205ENST00000497722 WASHC2CQ9Y4E1 1318 aa4.34□□□□□ -1.71
PSPC1-205ENST00000497722 SHTN1A0MZ66 631 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 PIPSLA2A3N6 862 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 NDUFA10O95299 355 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 ELANEP08246 267 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 PDGFRBP09619 1106 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 OSMP13725 252 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 TYRP1P17643 537 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 BMP5P22003 454 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 GUCY1A2P33402 732 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 SREBF1P36956 1147 aa4.33□□□□□ -1.72
PSPC1-205ENST00000497722 IARSP41252 1262 aaKnown RBP4.33□□□□□ -1.72
PSPC1-205ENST00000497722 GPR3P46089 330 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms