RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 CLASP2O75122 1294 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 TBCAO75347 108 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 IL9P15248 144 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 SCP2P22307 547 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 OSTNP61366 133 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 TUSC3Q13454 348 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 PTPN14Q15678 1187 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 PUS10Q3MIT2 529 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 CCDC183Q5T5S1 534 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 ZNF720Q7Z2F6 126 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 RABGGTAQ92696 567 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 PPP1R10Q96QC0 940 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 UHRF1Q96T88 793 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 COLEC11Q9BWP8 271 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 STRA6Q9BX79 667 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 ZHX3Q9H4I2 956 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 STK39Q9UEW8 545 aa17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 BARX2Q9UMQ3 279 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-214ENST00000497677 MUC3AQ02505 3323 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 SMIM28A0A1B0GU29 152 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 FRMD3A2A2Y4 597 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 K7ENM7 598 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 SOD2P04179 222 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 IGFBP6P24592 240 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 NDUFV1P49821 464 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 COASYQ13057 564 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 CLUL1Q15846 466 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 ZC2HC1CQ53FD0 456 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 GLRA4Q5JXX5 417 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 SLC39A4Q6P5W5 647 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 FAM178BQ8IXR5 827 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 ZMAT2Q96NC0 199 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 ACAP3Q96P50 834 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 CCDC94Q9BW85 323 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 GPR62Q9BZJ7 368 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 CHST7Q9NS84 486 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 KBTBD4Q9NVX7 518 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 CD207Q9UJ71 328 aa17.46■□□□□ 0.39
CTDSP1-214ENST00000497677 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 FSD2A1L4K1 749 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 CASTOR2A6NHX0 329 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 CLDN3O15551 220 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 MBTPS2O43462 519 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 NR1I2O75469 434 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 PPP1R37O75864 691 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 KCNE1P15382 129 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 HSP90AA2PQ14568 343 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 BMS1Q14692 1282 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 NOLC1Q14978 699 aaKnown RBP eCLIP17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 SLC10A6Q3KNW5 377 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 SEZ6Q53EL9 994 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 KIAA0319Q5VV43 1072 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 MAP4K3Q8IVH8 894 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 SMRP1Q8NCR6 262 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 SNX27Q96L92 541 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 HERC2P3Q9BVR0 1158 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 ANKFY1Q9P2R3 1169 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 SEL1LQ9UBV2 794 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 ADAM28Q9UKQ2 775 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 HCFC2Q9Y5Z7 792 aa17.45■□□□□ 0.38
CTDSP1-214ENST00000497677 FAM189A1O60320 539 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 CNPP09543 421 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 HARSP12081 509 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 GAP43P17677 238 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 LIG4P49917 911 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 YARSP54577 528 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 ZNF445P59923 1031 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 DSG1Q02413 1049 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 SMAD4Q13485 552 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 RESP18Q5W5W9 173 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 FUT10Q6P4F1 479 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 SYCE2Q6PIF2 218 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 CD300LGQ6UXG3 332 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 SLC22A17Q8WUG5 538 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 STAMQ92783 540 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 KLHL5Q96PQ7 755 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 S1PR5Q9H228 398 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 CUEDC2Q9H467 287 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 CD320Q9NPF0 282 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 TOPORSQ9NS56 1045 aaPredicted RBP17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 CNTN3Q9P232 1028 aa17.44■□□□□ 0.38
CTDSP1-214ENST00000497677 A0A0B4J269 797 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 ANKRD63C9JTQ0 380 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 HNRNPDLO14979 420 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 TADA2AO75478 443 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 KIF4AO95239 1232 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 CMA1P23946 247 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 ABCD1P33897 745 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 SOX4Q06945 474 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 SMAD2Q15796 467 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 ZSCAN23Q3MJ62 389 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 ANKRD54Q6NXT1 300 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 LLGL2Q6P1M3 1020 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 CNNM4Q6P4Q7 775 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 GPR65Q8IYL9 337 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 IQUBQ8NA54 791 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 DHX58Q96C10 678 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 BICD1Q96G01 975 aa17.43■□□□□ 0.38
CTDSP1-214ENST00000497677 FGFBP2Q9BYJ0 223 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms