RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
VPS45-210ENST00000497638 C12orf49Q9H741 205 aa8.85□□□□□ -0.99
VPS45-210ENST00000497638 INCENPQ9NQS7 918 aa8.85□□□□□ -0.99
VPS45-210ENST00000497638 FAM8A1Q9UBU6 413 aa8.85□□□□□ -0.99
VPS45-210ENST00000497638 MAPK8IP1Q9UQF2 711 aa8.85□□□□□ -0.99
VPS45-210ENST00000497638 USP15Q9Y4E8 981 aaPredicted RBP8.85□□□□□ -0.99
VPS45-210ENST00000497638 ZNF292O60281 2723 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 DBX1A6NMT0 343 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 PATL2C9JE40 543 aaKnown RBP8.84□□□□□ -0.99
VPS45-210ENST00000497638 ACACBO00763 2458 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 RNF113AO15541 343 aaKnown RBP8.84□□□□□ -0.99
VPS45-210ENST00000497638 USP17L7P0C7H9 530 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 ATF7P17544 494 aaPredicted RBP8.84□□□□□ -0.99
VPS45-210ENST00000497638 SLC16A2P36021 539 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 NOVP48745 357 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 ZNF200P98182 395 aaPredicted RBP8.84□□□□□ -0.99
VPS45-210ENST00000497638 PPARAQ07869 468 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 STXBP2Q15833 593 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 PTPN21Q16825 1174 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 TTBK2Q6IQ55 1244 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 LRFN4Q6PJG9 635 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 NSUN6Q8TEA1 469 aaKnown RBP8.84□□□□□ -0.99
VPS45-210ENST00000497638 P2RX5Q93086 422 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 NKD2Q969F2 451 aaPredicted RBP8.84□□□□□ -0.99
VPS45-210ENST00000497638 IWS1Q96ST2 819 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 NAPBQ9H115 298 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 IL17RBQ9NRM6 502 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 CLEC1BQ9P126 229 aa8.84□□□□□ -0.99
VPS45-210ENST00000497638 DDX41Q9UJV9 622 aaKnown RBP8.84□□□□□ -0.99
VPS45-210ENST00000497638 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.84□□□□□ -0.99
VPS45-210ENST00000497638 CEP250Q9BV73 2442 aa8.83□□□□□ -1
VPS45-210ENST00000497638 FSD2A1L4K1 749 aa8.83□□□□□ -1
VPS45-210ENST00000497638 C17orf102A2RUQ5 167 aa8.83□□□□□ -1
VPS45-210ENST00000497638 NMT2O60551 498 aa8.83□□□□□ -1
VPS45-210ENST00000497638 PPFIA4O75335 1185 aa8.83□□□□□ -1
VPS45-210ENST00000497638 HOXC8P31273 242 aa8.83□□□□□ -1
VPS45-210ENST00000497638 CAMK1Q14012 370 aa8.83□□□□□ -1
VPS45-210ENST00000497638 NAALADL2Q58DX5 795 aa8.83□□□□□ -1
VPS45-210ENST00000497638 ATP6V0A1Q93050 837 aa8.83□□□□□ -1
VPS45-210ENST00000497638 RPGRIP1Q96KN7 1286 aa8.83□□□□□ -1
VPS45-210ENST00000497638 RIPOR3Q96MK2 946 aa8.83□□□□□ -1
VPS45-210ENST00000497638 FAM53CQ9NYF3 392 aa8.83□□□□□ -1
VPS45-210ENST00000497638 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
VPS45-210ENST00000497638 WDR87Q6ZQQ6 2873 aa8.83□□□□□ -1
VPS45-210ENST00000497638 TTC3P53804 2025 aa8.83□□□□□ -1
VPS45-210ENST00000497638 FRMPD2Q68DX3 1309 aaPredicted RBP8.82□□□□□ -1
VPS45-210ENST00000497638 M0R2C6 588 aa8.82□□□□□ -1
VPS45-210ENST00000497638 EIF3JO75822 258 aaKnown RBP8.82□□□□□ -1
VPS45-210ENST00000497638 SLITRK5O94991 958 aa8.82□□□□□ -1
VPS45-210ENST00000497638 CTSHP09668 335 aa8.82□□□□□ -1
VPS45-210ENST00000497638 TOP1P11387 765 aaKnown RBP8.82□□□□□ -1
VPS45-210ENST00000497638 ETF1P62495 437 aaKnown RBP8.82□□□□□ -1
VPS45-210ENST00000497638 BTG3Q14201 252 aaPredicted RBP8.82□□□□□ -1
VPS45-210ENST00000497638 MLANAQ16655 118 aa8.82□□□□□ -1
VPS45-210ENST00000497638 SFRP5Q5T4F7 317 aa8.82□□□□□ -1
VPS45-210ENST00000497638 CDKAL1Q5VV42 579 aa8.82□□□□□ -1
VPS45-210ENST00000497638 ADSSL1Q8N142 457 aa8.82□□□□□ -1
VPS45-210ENST00000497638 SYTL5Q8TDW5 730 aaPredicted RBP8.82□□□□□ -1
VPS45-210ENST00000497638 SUSD6Q92537 303 aa8.82□□□□□ -1
VPS45-210ENST00000497638 PLPPR2Q96GM1 343 aa8.82□□□□□ -1
VPS45-210ENST00000497638 FAM84AQ96KN4 292 aa8.82□□□□□ -1
VPS45-210ENST00000497638 MIPEPQ99797 713 aa8.82□□□□□ -1
VPS45-210ENST00000497638 CARS2Q9HA77 564 aaKnown RBP8.82□□□□□ -1
VPS45-210ENST00000497638 ECHDC1Q9NTX5 307 aa8.82□□□□□ -1
VPS45-210ENST00000497638 BARX2Q9UMQ3 279 aaPredicted RBP8.82□□□□□ -1
VPS45-210ENST00000497638 CTNND2Q9UQB3 1225 aa8.82□□□□□ -1
VPS45-210ENST00000497638 DMXL1Q9Y485 3027 aa8.82□□□□□ -1
VPS45-210ENST00000497638 MYH7BA7E2Y1 1941 aa8.82□□□□□ -1
VPS45-210ENST00000497638 ORC4O43929 436 aa8.81□□□□□ -1
VPS45-210ENST00000497638 RANBP6O60518 1105 aaKnown RBP8.81□□□□□ -1
VPS45-210ENST00000497638 CSPG5O95196 566 aa8.81□□□□□ -1
VPS45-210ENST00000497638 GLP2RO95838 553 aa8.81□□□□□ -1
VPS45-210ENST00000497638 PDGFBP01127 241 aaPredicted RBP8.81□□□□□ -1
VPS45-210ENST00000497638 SMIM10L2AP0DMW4 78 aa8.81□□□□□ -1
VPS45-210ENST00000497638 SMIM10L2BP0DMW5 78 aa8.81□□□□□ -1
VPS45-210ENST00000497638 PDHBP11177 359 aa8.81□□□□□ -1
VPS45-210ENST00000497638 AFMP43652 599 aa8.81□□□□□ -1
VPS45-210ENST00000497638 NRIP1P48552 1158 aa8.81□□□□□ -1
VPS45-210ENST00000497638 ZNF543Q08ER8 600 aa8.81□□□□□ -1
VPS45-210ENST00000497638 USH1GQ495M9 461 aa8.81□□□□□ -1
VPS45-210ENST00000497638 LCE1DQ5T752 114 aa8.81□□□□□ -1
VPS45-210ENST00000497638 KCNV1Q6PIU1 500 aa8.81□□□□□ -1
VPS45-210ENST00000497638 FRMD5Q7Z6J6 570 aa8.81□□□□□ -1
VPS45-210ENST00000497638 ADGRD2Q7Z7M1 963 aa8.81□□□□□ -1
VPS45-210ENST00000497638 MCF2L2Q86YR7 1114 aa8.81□□□□□ -1
VPS45-210ENST00000497638 UBALD2Q8IYN6 164 aa8.81□□□□□ -1
VPS45-210ENST00000497638 GPATCH3Q96I76 525 aa8.81□□□□□ -1
VPS45-210ENST00000497638 HSPA12BQ96MM6 686 aa8.81□□□□□ -1
VPS45-210ENST00000497638 SPATA33Q96N06 139 aa8.81□□□□□ -1
VPS45-210ENST00000497638 TAAR1Q96RJ0 339 aa8.81□□□□□ -1
VPS45-210ENST00000497638 RMDN3Q96TC7 470 aa8.81□□□□□ -1
VPS45-210ENST00000497638 WNT10AQ9GZT5 417 aa8.81□□□□□ -1
VPS45-210ENST00000497638 FBRSQ9HAH7 460 aa8.81□□□□□ -1
VPS45-210ENST00000497638 DMDP11532 3685 aa8.81□□□□□ -1
VPS45-210ENST00000497638 ABCB11O95342 1321 aa8.8□□□□□ -1
VPS45-210ENST00000497638 KMT2BQ9UMN6 2715 aaPredicted RBP8.8□□□□□ -1
VPS45-210ENST00000497638 RBAK-RBAKDNI3L0D1 243 aa8.8□□□□□ -1
VPS45-210ENST00000497638 ITGB1P05556 798 aa8.8□□□□□ -1
VPS45-210ENST00000497638 SRGAP2BP0DMP2 458 aa8.8□□□□□ -1
VPS45-210ENST00000497638 GNAT1P11488 350 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms