RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 NNTQ13423 1086 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 EMC2Q15006 297 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 TCEAL1Q15170 157 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 ENOX2Q16206 610 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 SLC39A4Q6P5W5 647 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 OPTNQ96CV9 577 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 PCYT2Q99447 389 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 NAGPAQ9UK23 515 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 DNAJC12Q9UKB3 198 aa12.45□□□□□ -0.42
SNRNP200-208ENST00000497539 DENND3A2RUS2 1198 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 OPA1O60313 960 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 NAMPTP43490 491 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 FSTL1Q12841 308 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 FAM160B1Q5W0V3 765 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 C8orf74Q6P047 294 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 MAEAQ7L5Y9 396 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 TAS1R3Q7RTX0 852 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 PNMA8AQ86V59 439 aaPredicted RBP12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 PLEKHO2Q8TD55 490 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 FAM167AQ96KS9 214 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 IFT74Q96LB3 600 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 POLR3FQ9H1D9 316 aaPredicted RBP12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 KIAA1586Q9HCI6 787 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 PACSIN2Q9UNF0 486 aaPredicted RBP12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 TELO2Q9Y4R8 837 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 NCANO14594 1321 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 ADGRA3Q8IWK6 1321 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 ANKRD63C9JTQ0 380 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 ECM2O94769 699 aaPredicted RBP12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 ADRB2P07550 413 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 TRIM49P0CI25 452 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 TRIM49CP0CI26 452 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 RAB27AP51159 221 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 SEC24CP53992 1094 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 PPP3CAQ08209 521 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 CYFIP1Q7L576 1253 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 EPB41L5Q9HCM4 733 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 RNF14Q9UBS8 474 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 HYOU1Q9Y4L1 999 aa12.44□□□□□ -0.42
SNRNP200-208ENST00000497539 EMSYQ7Z589 1322 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 GAS2O43903 313 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 CNGA1P29973 690 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 EPHB4P54760 987 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 SNAPC2Q13487 334 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 SNRNP35Q16560 246 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 PTPROQ16827 1216 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 USP37Q86T82 979 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 TLR10Q9BXR5 811 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 TMEM134Q9H6X4 195 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 PLXNA1Q9UIW2 1896 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 CCDC169A6NNP5 214 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 TISP43B9A030 160 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 SMAPO00193 183 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 IBSPP21815 317 aaPredicted RBP12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 RDXP35241 583 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 PAFAH1B1P43034 410 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 GPC3P51654 580 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 DLG4P78352 724 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 CCDC15Q0P6D6 951 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 DRAP1Q14919 205 aaPredicted RBP12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 IFI16Q16666 785 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 PREPLQ4J6C6 727 aaPredicted RBP12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 PHLDB3Q6NSJ2 640 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 CXorf38Q8TB03 319 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 N4BP2L2Q92802 583 aaPredicted RBP12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 CENPHQ9H3R5 247 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 TMEM8AQ9HCN3 771 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 TXNRD2Q9NNW7 524 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 NRBP2Q9NSY0 501 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 ADAMTS1Q9UHI8 967 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
SNRNP200-208ENST00000497539 ZNFX1Q9P2E3 1918 aaKnown RBP12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 ZNF233A6NK53 670 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 DDX3XO00571 662 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 EVI5O60447 810 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 ZC3H11AO75152 810 aaKnown RBP eCLIP12.42□□□□□ -0.421e-6■■■■■ 27
SNRNP200-208ENST00000497539 FTCDO95954 541 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 GJA5P36382 358 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 FKBP1BP68106 108 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 CYP24A1Q07973 514 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 PLPPR4Q7Z2D5 763 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 GPD1LQ8N335 351 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 PARD3BQ8TEW8 1205 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 SEPT1Q8WYJ6 367 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 FAM81BQ96LP2 452 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 TMEM117Q9H0C3 514 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 GOLGB1Q14789 3259 aaKnown RBP12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 MAFO75444 373 aaPredicted RBP12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 KLRC1P26715 233 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 MXI1P50539 228 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 ARID5AQ03989 594 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 CFAP58Q5T655 872 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 CCDC62Q6P9F0 684 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 GJB7Q6PEY0 223 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 C15orf39Q6ZRI6 1047 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms