RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TEX11Q8IYF3 940 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 SH2D3CQ8N5H7 860 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 CELF5Q8N6W0 485 aaKnown RBP6.88□□□□□ -1.31
BRCA1-224ENST00000497488 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 CCDC191Q8NCU4 936 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 ASB15Q8WXK1 588 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 FMNL2Q96PY5 1086 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 DMRTA2Q96SC8 542 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 PDGFDQ9GZP0 370 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-224ENST00000497488 PAIP1Q9H074 479 aaKnown RBP6.88□□□□□ -1.31
BRCA1-224ENST00000497488 SEMA6CQ9H3T2 930 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 TMEM8AQ9HCN3 771 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 PRDM5Q9NQX1 630 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-224ENST00000497488 CNNM1Q9NRU3 951 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 KRT84Q9NSB2 600 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 SACM1LQ9NTJ5 587 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 RIC8BQ9NVN3 520 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 MARCH2Q9P0N8 246 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 ABCF2Q9UG63 623 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 TCFL5Q9UL49 500 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 ARHGAP26Q9UNA1 814 aa6.88□□□□□ -1.31
BRCA1-224ENST00000497488 ZNF608Q9ULD9 1512 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-224ENST00000497488 MYPNQ86TC9 1320 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 GTPBP10A4D1E9 387 aaKnown RBP6.87□□□□□ -1.31
BRCA1-224ENST00000497488 PRAMEF25A6NGN4 478 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 CLCA1A8K7I4 914 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 C22orf46C9J442 243 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 H7C0S8 307 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 KRIT1O00522 736 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 DYNC1LI2O43237 492 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-224ENST00000497488 THAP12O43422 761 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 SGPL1O95470 568 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 STARD3NLO95772 234 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 A1BGP04217 495 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 MMEP08473 750 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 NID1P14543 1247 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 JUPP14923 745 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 CST5P28325 142 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-224ENST00000497488 HOXD13P35453 343 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 ACTN2P35609 894 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 POLD2P49005 469 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 TNK2Q07912 1038 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 CUL4AQ13619 759 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 TSTQ16762 297 aaKnown RBP6.87□□□□□ -1.31
BRCA1-224ENST00000497488 RILPL1Q5EBL4 403 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 PRAMEF9Q5VWM5 478 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 BTBD8Q5XKL5 378 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 ACAD10Q6JQN1 1059 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 SLC30A6Q6NXT4 461 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 C22orf34Q6ZV56 151 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 KRT74Q7RTS7 529 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 NAT16Q8N8M0 369 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 ST8SIA4Q92187 359 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 CLPTM1LQ96KA5 538 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 SNX22Q96L94 193 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 GBP4Q96PP9 640 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 TSPAN18Q96SJ8 248 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 C7orf25Q9BPX7 421 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 SLF1Q9BQI6 1058 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 TXLNGYQ9BZA5 131 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 FOXP3Q9BZS1 431 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 ADAM7Q9H2U9 754 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 MLXIPQ9HAP2 919 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 NECTIN3Q9NQS3 549 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 ATP8A2Q9NTI2 1148 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 HAUS2Q9NVX0 235 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 PIH1D1Q9NWS0 290 aaKnown RBP6.87□□□□□ -1.31
BRCA1-224ENST00000497488 SYNPO2Q9UMS6 1093 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 SCAF8Q9UPN6 1271 aaKnown RBP6.87□□□□□ -1.31
BRCA1-224ENST00000497488 TELO2Q9Y4R8 837 aa6.87□□□□□ -1.31
BRCA1-224ENST00000497488 CUX1P39880 1505 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 FAM171A2A8MVW0 826 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 SHISA8B8ZZ34 492 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 PIP5K1BO14986 540 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 MAFO75444 373 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 TMEM63AO94886 807 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 PRLP01236 227 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 MT-ND5P03915 603 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 MTHFD1P11586 935 aaKnown RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 ENDOUP21128 410 aaKnown RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 MMP14P50281 582 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 SEC24CP53992 1094 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 CDC16Q13042 620 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 CDK5R2Q13319 367 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 COL9A3Q14050 684 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 UBXN11Q5T124 520 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 ANKRD34AQ69YU3 496 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 FBXO11Q86XK2 927 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 GLB1L3Q8NCI6 653 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 THAP4Q8WY91 577 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 MRPL9Q9BYD2 267 aaKnown RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 ARHGAP39Q9C0H5 1083 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 KIAA1683Q9H0B3 1180 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 DUSP15Q9H1R2 295 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 EPB41L4AQ9HCS5 686 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 SARS2Q9NP81 518 aaKnown RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 ARGLU1Q9NWB6 273 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-224ENST00000497488 GULP1Q9UBP9 304 aa6.86□□□□□ -1.31
BRCA1-224ENST00000497488 POLA1P09884 1462 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 SSU72P8A0A1W2PR75 194 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms