RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 PCSK4Q6UW60 755 aa5.74□□□□□ -1.49
TRIM4-205ENST00000496896 PQLC1Q8N2U9 271 aa5.74□□□□□ -1.49
TRIM4-205ENST00000496896 CBARPQ8N350 705 aaPredicted RBP5.74□□□□□ -1.49
TRIM4-205ENST00000496896 REPS2Q8NFH8 660 aa5.74□□□□□ -1.49
TRIM4-205ENST00000496896 SLC35B2Q8TB61 432 aa5.74□□□□□ -1.49
TRIM4-205ENST00000496896 UHRF1Q96T88 793 aaPredicted RBP5.74□□□□□ -1.49
TRIM4-205ENST00000496896 AKIP1Q9NQ31 210 aa5.74□□□□□ -1.49
TRIM4-205ENST00000496896 DMRT3Q9NQL9 472 aa5.74□□□□□ -1.49
TRIM4-205ENST00000496896 TRPM5Q9NZQ8 1165 aa5.74□□□□□ -1.49
TRIM4-205ENST00000496896 POGKQ9P215 609 aa5.74□□□□□ -1.49
TRIM4-205ENST00000496896 A0A087X1B8 175 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 DRGXA6NNA5 263 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 MARCH11A6NNE9 402 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 FOXN1O15353 648 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 HLA-DOAP06340 250 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 OSMP13725 252 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 GSPT1P15170 499 aaKnown RBP5.73□□□□□ -1.49
TRIM4-205ENST00000496896 NOMO1Q15155 1222 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 PTPAQ15257 358 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 AGAP9Q5VTM2 703 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 KCNV1Q6PIU1 500 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 RHOT2Q8IXI1 618 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 RPUSD2Q8IZ73 545 aaKnown RBP5.73□□□□□ -1.49
TRIM4-205ENST00000496896 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.73□□□□□ -1.49
TRIM4-205ENST00000496896 PROKR1Q8TCW9 393 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 SENP6Q9GZR1 1112 aaPredicted RBP5.73□□□□□ -1.49
TRIM4-205ENST00000496896 IKZF4Q9H2S9 585 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 ZNF768Q9H5H4 540 aaKnown RBP5.73□□□□□ -1.49
TRIM4-205ENST00000496896 MANSC1Q9H8J5 431 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 TMEM140Q9NV12 185 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 SIK3Q9Y2K2 1263 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 PCDHGA2Q9Y5H1 932 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 TNFRSF18Q9Y5U5 241 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 PCSK5Q92824 1860 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 PNPLA7Q6ZV29 1317 aa5.73□□□□□ -1.49
TRIM4-205ENST00000496896 SLC6A9P48067 706 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 RNASE9P60153 205 aaKnown RBP5.72□□□□□ -1.49
TRIM4-205ENST00000496896 FAM189BP81408 668 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 SEPT2Q15019 361 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 SYDE2Q5VT97 1194 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 AFMIDQ63HM1 303 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 ARHGEF19Q8IW93 802 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 RNF169Q8NCN4 708 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 C1orf162Q8NEQ5 155 aaPredicted RBP5.72□□□□□ -1.49
TRIM4-205ENST00000496896 MRI1Q9BV20 369 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 MLST8Q9BVC4 326 aa5.72□□□□□ -1.49
TRIM4-205ENST00000496896 CENPVL1A0A0U1RR11 272 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 ALG1L2C9J202 215 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 RAMP2O60895 175 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 NCR1O76036 304 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 RHOBTB3O94955 611 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 ATP5JP18859 108 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 CDK11BP21127 795 aaKnown RBP5.71□□□□□ -1.5
TRIM4-205ENST00000496896 PTTG1IPP53801 180 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 PDCD4Q53EL6 469 aaKnown RBP5.71□□□□□ -1.5
TRIM4-205ENST00000496896 LAIR1Q6GTX8 287 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 SEM1Q6ZVN7 128 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 AJAP1Q9UKB5 411 aaPredicted RBP5.71□□□□□ -1.5
TRIM4-205ENST00000496896 FPGT-TNNI3KV9GXZ4 949 aa5.71□□□□□ -1.5
TRIM4-205ENST00000496896 WNT10BO00744 389 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 ZNF185O15231 689 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 B3GALT2O43825 422 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 GPR32O75388 356 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 POMCP01189 267 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 CFIP05156 583 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 ALDH1A3P47895 512 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 CHN2P52757 468 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 BLOC1S1P78537 153 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 AMPD3Q01432 767 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 MTM1Q13496 603 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 FUBP3Q96I24 572 aaKnown RBP eCLIP5.7□□□□□ -1.5
TRIM4-205ENST00000496896 NEU1Q99519 415 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 C7orf25Q9BPX7 421 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 REXO4Q9GZR2 422 aaKnown RBP5.7□□□□□ -1.5
TRIM4-205ENST00000496896 SAP30BPQ9UHR5 308 aaKnown RBP5.7□□□□□ -1.5
TRIM4-205ENST00000496896 ATP11BQ9Y2G3 1177 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 DMRT1Q9Y5R6 373 aa5.7□□□□□ -1.5
TRIM4-205ENST00000496896 GRID2IPA4D2P6 1211 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 RAP2AP10114 183 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 IARSP41252 1262 aaKnown RBP5.69□□□□□ -1.5
TRIM4-205ENST00000496896 GUCY2FP51841 1108 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 NANOS3P60323 173 aaKnown RBP5.69□□□□□ -1.5
TRIM4-205ENST00000496896 MXRA7P84157 204 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 ATP8B2P98198 1209 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 MTMR1Q13613 665 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 UBXN2BQ14CS0 331 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 DACT2Q5SW24 774 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 PGM2L1Q6PCE3 622 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 OR2I1PQ8NGU4 316 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 FUBP1Q96AE4 644 aaKnown RBP5.69□□□□□ -1.5
TRIM4-205ENST00000496896 FAXDC2Q96IV6 333 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 TTPALQ9BTX7 342 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 TOR3AQ9H497 397 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 SERHL2Q9H4I8 314 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 KLHL11Q9NVR0 708 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 MKS1Q9NXB0 559 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 SLC23A1Q9UHI7 598 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 PACSIN3Q9UKS6 424 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 DNM3Q9UQ16 869 aa5.69□□□□□ -1.5
TRIM4-205ENST00000496896 USP15Q9Y4E8 981 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms