RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 C15orf39Q6ZRI6 1047 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 TRIM67Q6ZTA4 783 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 ZDHHC14Q8IZN3 488 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 CEP120Q8N960 986 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 HDAC7Q8WUI4 952 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 INTS4Q96HW7 963 aaKnown RBP13.59□□□□□ -0.23
CLDN12-213ENST00000496677 ZBTB45Q96K62 511 aaPredicted RBP13.59□□□□□ -0.23
CLDN12-213ENST00000496677 USTQ9Y2C2 406 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 PLXNA3P51805 1871 aa13.59□□□□□ -0.23
CLDN12-213ENST00000496677 TMEM189-UBE2V1I3L0A0 370 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 MCF2P10911 925 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 PDCP20941 246 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 SYT1P21579 422 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 LNX1Q8TBB1 728 aaPredicted RBP13.58□□□□□ -0.24
CLDN12-213ENST00000496677 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.24
CLDN12-213ENST00000496677 ZNF707Q96C28 371 aaPredicted RBP13.58□□□□□ -0.24
CLDN12-213ENST00000496677 ASIC4Q96FT7 647 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 ZMAT2Q96NC0 199 aaKnown RBP13.58□□□□□ -0.24
CLDN12-213ENST00000496677 CCSER1Q9C0I3 900 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 MAN1C1Q9NR34 630 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLDN12-213ENST00000496677 KCNG1Q9UIX4 513 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 SF3B1O75533 1304 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLDN12-213ENST00000496677 TRIP11Q15643 1979 aa13.58□□□□□ -0.24
CLDN12-213ENST00000496677 MYO10Q9HD67 2058 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 DENND4AQ7Z401 1863 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 TMEM221A6NGB7 291 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 M0R296 226 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 TGM5O43548 720 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 TOM1L1O75674 476 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 GLUD1P00367 558 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 KCNE1P15382 129 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 RPL17P18621 184 aaKnown RBP13.57□□□□□ -0.24
CLDN12-213ENST00000496677 FGFR3P22607 806 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 SP100P23497 879 aaPredicted RBP13.57□□□□□ -0.24
CLDN12-213ENST00000496677 UBA7P41226 1012 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 CLCNKBP51801 687 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 ZNF131P52739 623 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 NCKAP1LP55160 1127 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 SOX4Q06945 474 aaPredicted RBP13.57□□□□□ -0.24
CLDN12-213ENST00000496677 UPP1Q16831 310 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 GLRA4Q5JXX5 417 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 FAM171A1Q5VUB5 890 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 DCLRE1AQ6PJP8 1040 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 PRSS55Q6UWB4 352 aaPredicted RBP13.57□□□□□ -0.24
CLDN12-213ENST00000496677 MPZL3Q6UWV2 235 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 CYP26C1Q6V0L0 522 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 ZPBP2Q6X784 338 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 USP49Q70CQ1 688 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 APBB1IPQ7Z5R6 666 aaPredicted RBP13.57□□□□□ -0.24
CLDN12-213ENST00000496677 ZBTB33Q86T24 672 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 PALB2Q86YC2 1186 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 HASPINQ8TF76 798 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 CDK5RAP3Q96JB5 506 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 FIZ1Q96SL8 496 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 CLSTN3Q9BQT9 956 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 TTPALQ9BTX7 342 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 CCDC94Q9BW85 323 aaPredicted RBP13.57□□□□□ -0.24
CLDN12-213ENST00000496677 HAPLN2Q9GZV7 340 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 PLEKHA4Q9H4M7 779 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 MORC2Q9Y6X9 1032 aaPredicted RBP13.57□□□□□ -0.24
CLDN12-213ENST00000496677 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
CLDN12-213ENST00000496677 MTCL1Q9Y4B5 1905 aaKnown RBP13.56□□□□□ -0.24
CLDN12-213ENST00000496677 CCDC195A0A1B0GUA6 201 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 VPS37CA5D8V6 355 aaPredicted RBP13.56□□□□□ -0.24
CLDN12-213ENST00000496677 ADAM12O43184 909 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 SPATA31D3P0C874 917 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 PLCG1P19174 1290 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 PLA2G5P39877 138 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 MCL1Q07820 350 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 MCM6Q14566 821 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
CLDN12-213ENST00000496677 SLC10A6Q3KNW5 377 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 FAM173BQ6P4H8 233 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 SPATA31D4Q6ZUB0 917 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 GPBP1Q86WP2 473 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 C3orf58Q8NDZ4 430 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 RAD54LQ92698 747 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 CALML4Q96GE6 196 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 EPSTI1Q96J88 318 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 SNX27Q96L92 541 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 UROC1Q96N76 676 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 ACAP3Q96P50 834 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 REEP2Q9BRK0 252 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 CNTN3Q9P232 1028 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
CLDN12-213ENST00000496677 ODF2LQ9ULJ1 636 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 MTMR6Q9Y217 621 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 HCN4Q9Y3Q4 1203 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 C2orf16Q68DN1 1984 aa13.56□□□□□ -0.24
CLDN12-213ENST00000496677 VWA8A3KMH1 1905 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
CLDN12-213ENST00000496677 RFPL2O75678 378 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms