RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 DGAT1O75907 488 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 SUPT20HL2P0C7V6 817 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 UBA1P22314 1058 aaKnown RBP13.21□□□□□ -0.29
PDE6B-212ENST00000496514 IRAK1P51617 712 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 DR1Q01658 176 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 SUPT20HL1Q3ZLR7 823 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 TDRD10Q5VZ19 366 aaKnown RBP13.21□□□□□ -0.29
PDE6B-212ENST00000496514 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 IQCKQ8N0W5 287 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 KCTD17Q8N5Z5 321 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 SHC3Q92529 594 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 ACSF2Q96CM8 615 aaPredicted RBP13.21□□□□□ -0.29
PDE6B-212ENST00000496514 CYFIP2Q96F07 1278 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 ANAPC7Q9UJX3 599 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 AGO2Q9UKV8 859 aaKnown RBP13.21□□□□□ -0.29
PDE6B-212ENST00000496514 A0A0A6YYK5 440 aaPredicted RBP13.21□□□□□ -0.29
PDE6B-212ENST00000496514 K7ERI5 159 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 HLA-DRAP01903 254 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 RRM1P23921 792 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 TMOD1P28289 359 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 SLCO1A2P46721 670 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 IGBP1P78318 339 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 STXBP2Q15833 593 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 GNPTABQ3T906 1256 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 ZFYVE27Q5T4F4 411 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 BCAS4Q8TDM0 211 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 KIFAP3Q92845 792 aa13.21□□□□□ -0.29
PDE6B-212ENST00000496514 OPA1O60313 960 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 RTN2O75298 545 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 ARIH2O95376 493 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 STRN3Q13033 797 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 PWWP2AQ96N64 755 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 NCAPGQ9BPX3 1015 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 HERPUD2Q9BSE4 406 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 RASSF4Q9H2L5 321 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 APOBEC3GQ9HC16 384 aaKnown RBP13.2□□□□□ -0.3
PDE6B-212ENST00000496514 UTP11Q9Y3A2 253 aaKnown RBP13.2□□□□□ -0.3
PDE6B-212ENST00000496514 SNCAIPQ9Y6H5 919 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 GGPS1O95749 300 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 SHBGP04278 402 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 CEP120Q8N960 986 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 FBXO25Q8TCJ0 367 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 FOXO6A8MYZ6 492 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 PSMC4P43686 418 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 ALCAMQ13740 583 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 HSDL1Q3SXM5 330 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 RASGEF1CQ8N431 466 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 PRELID2Q8N945 189 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 PCYT2Q99447 389 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 MSTO1Q9BUK6 570 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 VPS33BQ9H267 617 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 C1orf112Q9NSG2 853 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 RBAKQ9NYW8 714 aaPredicted RBP13.2□□□□□ -0.3
PDE6B-212ENST00000496514 INTUQ9ULD6 942 aa13.2□□□□□ -0.3
PDE6B-212ENST00000496514 SYNGAP1Q96PV0 1343 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 FGFR4P22455 802 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 PPFIA1Q13136 1202 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 JAMLQ86YT9 394 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 SH3GL2Q99962 352 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 ZSWIM1Q9BR11 485 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 TXNRD2Q9NNW7 524 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 PPANQ9NQ55 473 aaKnown RBP13.19□□□□□ -0.3
PDE6B-212ENST00000496514 ZNF112Q9UJU3 913 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 DAAM1Q9Y4D1 1078 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 PCDHB4Q9Y5E5 795 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 MYH9P35579 1960 aaKnown RBP13.19□□□□□ -0.3
PDE6B-212ENST00000496514 OATP04181 439 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
PDE6B-212ENST00000496514 Q3C1V9 767 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
PDE6B-212ENST00000496514 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 ATP8B4Q8TF62 1192 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 SLC7A3Q8WY07 619 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 NLRP4Q96MN2 994 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 IWS1Q96ST2 819 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 HOXC10Q9NYD6 342 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 NOVA2Q9UNW9 492 aaKnown RBP13.19□□□□□ -0.3
PDE6B-212ENST00000496514 SH3BP1Q9Y3L3 701 aa13.19□□□□□ -0.3
PDE6B-212ENST00000496514 VNN1O95497 513 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 CST3P01034 146 aaPredicted RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 ALDH5A1P51649 535 aaPredicted RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 CDR2Q01850 454 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 GHRHRQ02643 423 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 ATP13A4Q4VNC1 1196 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 XKR3Q5GH77 459 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 CRELD2Q6UXH1 353 aaPredicted RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 APOBEC3FQ8IUX4 373 aaKnown RBP13.18□□□□□ -0.3
PDE6B-212ENST00000496514 CCDC50Q8IVM0 306 aa13.18□□□□□ -0.3
PDE6B-212ENST00000496514 C12orf56Q8IXR9 622 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms