RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 ABLIM1O14639 778 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 BRD1O95696 1058 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 KRT18P05783 430 aaKnown RBP12.97□□□□□ -0.33
THBS3-208ENST00000496332 HARSP12081 509 aaKnown RBP12.97□□□□□ -0.33
THBS3-208ENST00000496332 DDIT3P35638 169 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 MTHFRP42898 656 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 NCKAP1LP55160 1127 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 HERC4Q5GLZ8 1057 aaPredicted RBP12.97□□□□□ -0.33
THBS3-208ENST00000496332 ATAT1Q5SQI0 421 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 ALKAL1Q6UXT8 129 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 TMC5Q6UXY8 1006 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 MYCT1Q8N699 235 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 RIN2Q8WYP3 895 aaPredicted RBP12.97□□□□□ -0.33
THBS3-208ENST00000496332 RIPOR3Q96MK2 946 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 CLIC6Q96NY7 704 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 PPP1R10Q96QC0 940 aaKnown RBP12.97□□□□□ -0.33
THBS3-208ENST00000496332 USP28Q96RU2 1077 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 POMKQ9H5K3 350 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
THBS3-208ENST00000496332 TOPORSQ9NS56 1045 aaPredicted RBP12.97□□□□□ -0.33
THBS3-208ENST00000496332 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.33
THBS3-208ENST00000496332 H0YCG3 227 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 TOM1L1O75674 476 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 FAM13AO94988 1023 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 SP100P23497 879 aaPredicted RBP12.96□□□□□ -0.33
THBS3-208ENST00000496332 XKR4Q5GH76 650 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 RTP2Q5QGT7 225 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 FAM171A1Q5VUB5 890 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 ZPBP2Q6X784 338 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 HAUS6Q7Z4H7 955 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 CEP57Q86XR8 500 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 PALB2Q86YC2 1186 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 HSCBQ8IWL3 235 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 GPR65Q8IYL9 337 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 FEZF2Q8TBJ5 459 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 LARP4BQ92615 738 aaKnown RBP12.96□□□□□ -0.33
THBS3-208ENST00000496332 ACAP3Q96P50 834 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 ZHX3Q9H4I2 956 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 SFXN1Q9H9B4 322 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 PARVGQ9HBI0 331 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 MAN1C1Q9NR34 630 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.96□□□□□ -0.33
THBS3-208ENST00000496332 FNIP2Q9P278 1114 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 ANKFY1Q9P2R3 1169 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 CCDC39Q9UFE4 941 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 RAPGEFL1Q9UHV5 662 aa12.96□□□□□ -0.33
THBS3-208ENST00000496332 CLDN3O15551 220 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 TRAK2O60296 914 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 TBCAO75347 108 aaKnown RBP12.95□□□□□ -0.34
THBS3-208ENST00000496332 B3GAT3O94766 335 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 GLUD1P00367 558 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 SPATA31D3P0C874 917 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 MYBP10242 640 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 RPL17P18621 184 aaKnown RBP12.95□□□□□ -0.34
THBS3-208ENST00000496332 IGFBP6P24592 240 aaPredicted RBP12.95□□□□□ -0.34
THBS3-208ENST00000496332 MATR3P43243 847 aaKnown RBP eCLIP12.95□□□□□ -0.34
THBS3-208ENST00000496332 CLCNKBP51801 687 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 ZNF131P52739 623 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 CREMQ03060 361 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 ELAVL2Q12926 359 aaKnown RBP12.95□□□□□ -0.34
THBS3-208ENST00000496332 NOLC1Q14978 699 aaKnown RBP eCLIP12.95□□□□□ -0.34
THBS3-208ENST00000496332 SLC39A14Q15043 492 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 SEZ6Q53EL9 994 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 PRSS55Q6UWB4 352 aaPredicted RBP12.95□□□□□ -0.34
THBS3-208ENST00000496332 SPATA31D4Q6ZUB0 917 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 GPR149Q86SP6 731 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 BICD1Q96G01 975 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 SNX27Q96L92 541 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 UROC1Q96N76 676 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 ZMAT2Q96NC0 199 aaKnown RBP12.95□□□□□ -0.34
THBS3-208ENST00000496332 TTPALQ9BTX7 342 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 GOLGA2P5Q9HBQ8 144 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 DPP7Q9UHL4 492 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 TBX20Q9UMR3 447 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 NR2E1Q9Y466 385 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 TRIOO75962 3097 aa12.95□□□□□ -0.34
THBS3-208ENST00000496332 PRR33A8MZF0 331 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 TMEM189-UBE2V1I3L0A0 370 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 K7ENM7 598 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 MEFVO15553 781 aaPredicted RBP12.94□□□□□ -0.34
THBS3-208ENST00000496332 TGM5O43548 720 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 KCNE1P15382 129 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 SCP2P22307 547 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 TXLNAP40222 546 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
THBS3-208ENST00000496332 MCL1Q07820 350 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 UPP1Q16831 310 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 RRAGBQ5VZM2 374 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 ELMSAN1Q6PJG2 1045 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 CD300LGQ6UXG3 332 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 KRI1Q8N9T8 703 aaKnown RBP12.94□□□□□ -0.34
THBS3-208ENST00000496332 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
THBS3-208ENST00000496332 PIK3R5Q8WYR1 880 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 EDAQ92838 391 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 KCNN1Q92952 543 aa12.94□□□□□ -0.34
THBS3-208ENST00000496332 HAPLN2Q9GZV7 340 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms