RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 ZNF397Q8NF99 534 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 HELQQ8TDG4 1101 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 GJA10Q969M2 543 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 WDR24Q96S15 920 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 TMEM175Q9BSA9 504 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 KIAA0100Q14667 2235 aaKnown RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 KCNA2P16389 499 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 EIF4BP23588 611 aaKnown RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 DEFB103AP81534 67 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 CCSAPQ6IQ19 270 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 ETNPPLQ8TBG4 499 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 UNC45AQ9H3U1 944 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 PARP14Q460N5 1801 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 LOXHD1Q8IVV2 1947 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 CXCL10P02778 98 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 ITIH3Q06033 890 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 CTTNQ14247 550 aaKnown RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 LPIN1Q14693 890 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 ELF2Q15723 593 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 TCEAL5Q5H9L2 206 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 TOP1MTQ969P6 601 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 TUBGCP2Q9BSJ2 902 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 NUP58Q9BVL2 599 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 MRPL4Q9BYD3 311 aaKnown RBP9.24□□□□□ -0.93
VPS13B-206ENST00000496144 SLC39A2Q9NP94 309 aa9.24□□□□□ -0.93
VPS13B-206ENST00000496144 A0A0U1RQJ8 604 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 COASYQ13057 564 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 FAM26DQ5JW98 314 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 CENPPQ6IPU0 288 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 ATRIPQ8WXE1 791 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 HPS3Q969F9 1004 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 C2CD2LO14523 706 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 FGF18O76093 207 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 PPP2R3AQ06190 1150 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 DDX12PQ92771 950 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 IQCDQ96DY2 449 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 LARSQ9P2J5 1176 aaKnown RBP9.23□□□□□ -0.93
VPS13B-206ENST00000496144 K7ERI5 159 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 PHACTR2O75167 634 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 SLC12A3P55017 1021 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 LRRC63Q05C16 580 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 LEXMQ3ZCV2 418 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS13B-206ENST00000496144 NUDT18Q6ZVK8 323 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 DYMQ7RTS9 669 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 CREBRFQ8IUR6 639 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 CCDC117Q8IWD4 279 aaPredicted RBP9.23□□□□□ -0.93
VPS13B-206ENST00000496144 DDX27Q96GQ7 796 aaKnown RBP9.23□□□□□ -0.93
VPS13B-206ENST00000496144 PRG3Q9Y2Y8 225 aaPredicted RBP9.23□□□□□ -0.93
VPS13B-206ENST00000496144 PRKCBP05771 671 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 USP41Q3LFD5 358 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 CC2D1AQ6P1N0 951 aaPredicted RBP9.23□□□□□ -0.93
VPS13B-206ENST00000496144 GUF1Q8N442 669 aaKnown RBP9.23□□□□□ -0.93
VPS13B-206ENST00000496144 CCDC26Q8TAB7 109 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 DNAJC19Q96DA6 116 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 C17orf80Q9BSJ5 609 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 PANK4Q9NVE7 773 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
VPS13B-206ENST00000496144 CPB1P15086 417 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 MYOGP15173 224 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 GLUD2P49448 558 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 KLK7P49862 253 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 GNG11P61952 73 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 MEA1Q16626 185 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 ACRBPQ8NEB7 543 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 BEST2Q8NFU1 509 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 CSGALNACT1Q8TDX6 532 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 PBXIP1Q96AQ6 731 aa9.23□□□□□ -0.93
VPS13B-206ENST00000496144 ASTN1O14525 1302 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 HAS3O00219 553 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 SPIRE1Q08AE8 756 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 VWA3BQ502W6 1294 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 TRAPPC12Q8WVT3 735 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 C16orf70Q9BSU1 422 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 OPLAHO14841 1288 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 NPTXRO95502 500 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 ZNF668Q96K58 619 aaPredicted RBP9.22□□□□□ -0.93
VPS13B-206ENST00000496144 SFXN1Q9H9B4 322 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 RPF1Q9H9Y2 349 aaKnown RBP9.22□□□□□ -0.93
VPS13B-206ENST00000496144 RGS18Q9NS28 235 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 LZTS1Q9Y250 596 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 TTC26A0AVF1 554 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 MSH4O15457 936 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 FGFR1OPO95684 399 aaKnown RBP9.22□□□□□ -0.93
VPS13B-206ENST00000496144 FGF19O95750 216 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 KCNA4P22459 653 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 PTPN5P54829 565 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 ZC3H3Q8IXZ2 948 aaKnown RBP9.22□□□□□ -0.93
VPS13B-206ENST00000496144 VPS52Q8N1B4 723 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 KAT2BQ92831 832 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 ERGIC2Q96RQ1 377 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 TSG101Q99816 390 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 APOL5Q9BWW9 433 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 ALG13Q9NP73 1137 aaKnown RBP9.22□□□□□ -0.93
VPS13B-206ENST00000496144 GIT1Q9Y2X7 761 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 A0A087WZ62 844 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 FRMD3A2A2Y4 597 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 EFCAB8A8MWE9 144 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 ANXA13P27216 316 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 ZNF662Q6ZS27 426 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms