RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 GALR2O43603 387 aaPredicted RBP20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 ST18O60284 1047 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 N4BP1O75113 896 aaKnown RBP20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 DMP1Q13316 513 aaPredicted RBP20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 NAB2Q15742 525 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 PSMD5Q16401 504 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 GLRA4Q5JXX5 417 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 LIN9Q5TKA1 542 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 PDXDC1Q6P996 788 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 FLCNQ8NFG4 579 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 DRC1Q96MC2 740 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 FAM86C1Q9NVL1 165 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 EPS15L1Q9UBC2 864 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 TNFSF13BQ9Y275 285 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 PHLPP2Q6ZVD8 1323 aa20.25■□□□□ 0.83
CLCNKA-207ENST00000495784 ZMYND10O75800 440 aa20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 PAPLNO95428 1278 aa20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 PRPHP41219 470 aa20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 NPTX2P47972 431 aa20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 CLCN5P51795 746 aa20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 GET4Q7L5D6 327 aaPredicted RBP20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 LNX1Q8TBB1 728 aaPredicted RBP20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 MYADMQ96S97 322 aa20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 CLSTN3Q9BQT9 956 aa20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 FBXW11Q9UKB1 542 aa20.24■□□□□ 0.83
CLCNKA-207ENST00000495784 H0Y858 1186 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 HIP1RO75146 1068 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 B3GAT3O94766 335 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 CDC25AP30304 524 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 YARSP54577 528 aaKnown RBP20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 ZRSR1Q15695 479 aaKnown RBP20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 IL17AQ16552 155 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 ZNF568Q3ZCX4 644 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 RILPL1Q5EBL4 403 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 RSAD2Q8WXG1 361 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 RUSC1Q9BVN2 902 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 CCDC94Q9BW85 323 aaPredicted RBP20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 MRPL4Q9BYD3 311 aaKnown RBP20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 KMT5AQ9NQR1 393 aa20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 TOPORSQ9NS56 1045 aaPredicted RBP20.23■□□□□ 0.83
CLCNKA-207ENST00000495784 GRM5P41594 1212 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 PPM1LQ5SGD2 360 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 DCLRE1AQ6PJP8 1040 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 DAW1Q8N136 415 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 SIX5Q8N196 739 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 NXPE3Q969Y0 559 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 UROC1Q96N76 676 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 PPP1R10Q96QC0 940 aaKnown RBP20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 ACO2Q99798 780 aaKnown RBP20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 CDT1Q9H211 546 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 TMEM134Q9H6X4 195 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 C17orf75Q9HAS0 396 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 RBM19Q9Y4C8 960 aaKnown RBP20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 CACNA1HO95180 2353 aa20.22■□□□□ 0.83
CLCNKA-207ENST00000495784 H3BQV1 296 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 TMEM189-UBE2V1I3L0A0 370 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 NARSO43776 548 aaKnown RBP20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 C8AP07357 584 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 HNRNPA1P09651 372 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 CLCNKBP51801 687 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 OSTNP61366 133 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 RINT1Q6NUQ1 792 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 CEP120Q8N960 986 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 TCHPQ9BT92 498 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 ARHGAP28Q9P2N2 729 aa20.21■□□□□ 0.83
CLCNKA-207ENST00000495784 SMIM28A0A1B0GU29 152 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 ADAM12O43184 909 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 TRAPPC3O43617 180 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 CFHP08603 1231 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 LAMP2P13473 410 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 FGFR3P22607 806 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 FSHRP23945 695 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 UPP1Q16831 310 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 CWF19L1Q69YN2 538 aaKnown RBP20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 C1orf186Q6ZWK4 172 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 KCNK18Q7Z418 384 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 GRASPQ7Z6J2 395 aaPredicted RBP20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 SLC44A3Q8N4M1 653 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 TMX3Q96JJ7 454 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 MMTAG2Q9BU76 263 aaKnown RBP20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 TIPINQ9BVW5 301 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 TARS2Q9BW92 718 aaKnown RBP20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 PTPRHQ9HD43 1115 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 SLC38A7Q9NVC3 462 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 POLIQ9UNA4 740 aa20.2■□□□□ 0.82
CLCNKA-207ENST00000495784 SLC16A4O15374 487 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 XYLBO75191 536 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 MCF2P10911 925 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 AOC1P19801 751 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 RFX1P22670 979 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 OR1D2P34982 312 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 ATP2C1P98194 919 aaPredicted RBP20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 STRN3Q13033 797 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 MAPK7Q13164 816 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 RAB33AQ14088 237 aa20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 DDX27Q96GQ7 796 aaKnown RBP20.19■□□□□ 0.82
CLCNKA-207ENST00000495784 CDK5RAP3Q96JB5 506 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms