RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 CAGE1Q8TC20 777 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 SMCR8Q8TEV9 937 aaPredicted RBP9.35□□□□□ -0.91
EPHA4-213ENST00000495693 EEF2KMTQ96G04 330 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 STK33Q9BYT3 514 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 CYP39A1Q9NYL5 469 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 KLK14Q9P0G3 267 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 COL20A1Q9P218 1284 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 SLC9A2Q9UBY0 812 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 KLF15Q9UIH9 416 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 REXO2Q9Y3B8 237 aaKnown RBP9.35□□□□□ -0.91
EPHA4-213ENST00000495693 HYOU1Q9Y4L1 999 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 LOC285556D6RIA3 1793 aa9.35□□□□□ -0.91
EPHA4-213ENST00000495693 IGSF9BQ9UPX0 1349 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 A0A0A6YYK5 440 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 GRID2IPA4D2P6 1211 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 GAS2O43903 313 aaKnown RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 EGFRP00533 1210 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 EPXP11678 715 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 PON1P27169 355 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 NMT1P30419 496 aaKnown RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 GTF2H1P32780 548 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 FMO5P49326 533 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 IRX3P78415 501 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 MYL7Q01449 175 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 ITGB3BPQ13352 177 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 NEDD9Q14511 834 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 XKR9Q5GH70 373 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 XKR3Q5GH77 459 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 CCDC181Q5TID7 509 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 PPP1R2P3Q6NXS1 205 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 C16orf46Q6P387 395 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 FBXO38Q6PIJ6 1188 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 USP50Q70EL3 339 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 FASTKD5Q7L8L6 764 aaKnown RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 RIOX2Q8IUF8 465 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 ANKRD13AQ8IZ07 590 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 MSANTD4Q8NCY6 345 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 EDARADDQ8WWZ3 215 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 ZKSCAN4Q969J2 545 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 FAM167AQ96KS9 214 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 FIZ1Q96SL8 496 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 MDFIQ99750 246 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 JPH2Q9BR39 696 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 NTPCRQ9BSD7 190 aaKnown RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 FGFBP2Q9BYJ0 223 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 ATP6V0A4Q9HBG4 840 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 NLRC4Q9NPP4 1024 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
EPHA4-213ENST00000495693 SNX12Q9UMY4 172 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 ZMYM2Q9UBW7 1377 aa9.34□□□□□ -0.91
EPHA4-213ENST00000495693 ASTN2O75129 1339 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-213ENST00000495693 SIN3BO75182 1162 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 NOL4O94818 638 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 EPB42P16452 691 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 GARTP22102 1010 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 NAP1L1P55209 391 aaKnown RBP9.33□□□□□ -0.92
EPHA4-213ENST00000495693 NPEPPSP55786 919 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 SPEM2Q0P670 501 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 MAPK7Q13164 816 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 TMEM132BQ14DG7 1078 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 NAB2Q15742 525 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 GLE1Q53GS7 698 aaKnown RBP9.33□□□□□ -0.92
EPHA4-213ENST00000495693 BRDTQ58F21 947 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-213ENST00000495693 HGSNATQ68CP4 663 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 WDR93Q6P2C0 686 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 ENOSF1Q7L5Y1 443 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 ZNF572Q7Z3I7 529 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-213ENST00000495693 HAUS6Q7Z4H7 955 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 ERO1BQ86YB8 467 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 MAP4K3Q8IVH8 894 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 ANKRD35Q8N283 1001 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 IL31RAQ8NI17 732 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 TRPM4Q8TD43 1214 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 TAF4BQ92750 862 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 BORCS6Q96GS4 357 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 CEP170P1Q96L14 293 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 KMT5AQ9NQR1 393 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 APEX2Q9UBZ4 518 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 RAB21Q9UL25 225 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 USP20Q9Y2K6 914 aa9.33□□□□□ -0.92
EPHA4-213ENST00000495693 DIS3Q9Y2L1 958 aaKnown RBP9.33□□□□□ -0.92
EPHA4-213ENST00000495693 DNMT3AQ9Y6K1 912 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-213ENST00000495693 A0A0G2JMZ2 1700 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 MACROD2A1Z1Q3 448 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 SHISA8B8ZZ34 492 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 EPHB6O15197 1021 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 CLIC2O15247 247 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 ZC3H11AO75152 810 aaKnown RBP eCLIP9.32□□□□□ -0.92
EPHA4-213ENST00000495693 LDHAP00338 332 aaKnown RBP9.32□□□□□ -0.92
EPHA4-213ENST00000495693 SUPT20HL2P0C7V6 817 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 KCNA2P16389 499 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 TAL1P17542 331 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-213ENST00000495693 HOXD13P35453 343 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 SOX5P35711 763 aa9.32□□□□□ -0.92
EPHA4-213ENST00000495693 CYP2J2P51589 502 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms