RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 KIF4AO95239 1232 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 KRT2P35908 639 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 MAGEA9P43362 315 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 NR5A1Q13285 461 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 RAB33AQ14088 237 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 ZBTB8OSQ8IWT0 167 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 DCLK2Q8N568 766 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 HASPINQ8TF76 798 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 TNFRSF25Q93038 417 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 NELL2Q99435 816 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 BRMS1Q9HCU9 246 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 POLIQ9UNA4 740 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 CACNA1IQ9P0X4 2223 aa19.41■□□□□ 0.7
TMEM53-209ENST00000495630 OTOGLQ3ZCN5 2332 aa19.4■□□□□ 0.7
TMEM53-209ENST00000495630 MED19A0JLT2 244 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-209ENST00000495630 FAM205CA6NFA0 338 aa19.4■□□□□ 0.7
TMEM53-209ENST00000495630 TXKP42681 527 aa19.4■□□□□ 0.7
TMEM53-209ENST00000495630 AXDND1Q5T1B0 1012 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-209ENST00000495630 CDCA2Q69YH5 1023 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-209ENST00000495630 MCPH1Q8NEM0 835 aa19.4■□□□□ 0.7
TMEM53-209ENST00000495630 ITFG1Q8TB96 612 aa19.4■□□□□ 0.7
TMEM53-209ENST00000495630 C2orf40Q9H1Z8 148 aa19.4■□□□□ 0.7
TMEM53-209ENST00000495630 SPATA6Q9NWH7 488 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-209ENST00000495630 SNTG2Q9NY99 539 aa19.4■□□□□ 0.7
TMEM53-209ENST00000495630 DMXL1Q9Y485 3027 aa19.4■□□□□ 0.7
TMEM53-209ENST00000495630 TDRD15B5MCY1 1934 aaKnown RBP19.39■□□□□ 0.7
TMEM53-209ENST00000495630 A0A087WWV3 80 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 SPTLC1O15269 473 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 ADAM12O43184 909 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 USO1O60763 962 aaKnown RBP19.39■□□□□ 0.69
TMEM53-209ENST00000495630 CTDNEP1O95476 244 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 UBXN2BQ14CS0 331 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 NAB2Q15742 525 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 MAPK6Q16659 721 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 ZBTB41Q5SVQ8 909 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.39■□□□□ 0.69
TMEM53-209ENST00000495630 MAEAQ7L5Y9 396 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 GPR161Q8N6U8 529 aaKnown RBP19.39■□□□□ 0.69
TMEM53-209ENST00000495630 SLC7A14Q8TBB6 771 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 MTMR9Q96QG7 549 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 ADPGKQ9BRR6 497 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 PDZD7Q9H5P4 517 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 GPRC5CQ9NQ84 441 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 TPCN1Q9ULQ1 816 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 MTF2Q9Y483 593 aaPredicted RBP19.39■□□□□ 0.69
TMEM53-209ENST00000495630 PCDHGA2Q9Y5H1 932 aa19.39■□□□□ 0.69
TMEM53-209ENST00000495630 NEMFO60524 1076 aa19.38■□□□□ 0.69
TMEM53-209ENST00000495630 SPATA31C1P0DKV0 1188 aa19.38■□□□□ 0.69
TMEM53-209ENST00000495630 ATP2B1P20020 1258 aa19.38■□□□□ 0.69
TMEM53-209ENST00000495630 FGFR3P22607 806 aa19.38■□□□□ 0.69
TMEM53-209ENST00000495630 OR1D2P34982 312 aa19.38■□□□□ 0.69
TMEM53-209ENST00000495630 PRPF4BQ13523 1007 aaKnown RBP19.38■□□□□ 0.69
TMEM53-209ENST00000495630 PABPC1LQ4VXU2 614 aaKnown RBP19.38■□□□□ 0.69
TMEM53-209ENST00000495630 VARS2Q5ST30 1063 aaKnown RBP19.38■□□□□ 0.69
TMEM53-209ENST00000495630 ATRIPQ8WXE1 791 aa19.38■□□□□ 0.69
TMEM53-209ENST00000495630 CLDN23Q96B33 292 aa19.38■□□□□ 0.69
TMEM53-209ENST00000495630 TUFT1Q9NNX1 390 aa19.38■□□□□ 0.69
TMEM53-209ENST00000495630 DNMT3BQ9UBC3 853 aaKnown RBP19.38■□□□□ 0.69
TMEM53-209ENST00000495630 FRYLO94915 3013 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 TTLL13PA6NNM8 815 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 TMEM189-UBE2V1I3L0A0 370 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 ACKR2O00590 384 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 NCAM2O15394 837 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 RECQL4O94761 1208 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 FDPSP14324 419 aaKnown RBP19.37■□□□□ 0.69
TMEM53-209ENST00000495630 SDHBP21912 280 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 RBM25P49756 843 aaKnown RBP19.37■□□□□ 0.69
TMEM53-209ENST00000495630 CSTF1Q05048 431 aaKnown RBP19.37■□□□□ 0.69
TMEM53-209ENST00000495630 TMEM132AQ24JP5 1023 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 NOSTRINQ8IVI9 506 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 NPAS3Q8IXF0 933 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 NACC1Q96RE7 527 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 LTB4R2Q9NPC1 389 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 GDE1Q9NZC3 331 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 MTRRQ9UBK8 725 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 BACE2Q9Y5Z0 518 aa19.37■□□□□ 0.69
TMEM53-209ENST00000495630 DTNBO60941 627 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 ECI2O75521 394 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 B3GAT3O94766 335 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 ANKRD1Q15327 319 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 CATSPER3Q86XQ3 398 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 ZBTB44Q8NCP5 570 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 KXD1Q9BQD3 176 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 CXCL16Q9H2A7 254 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 AVENQ9NQS1 362 aaPredicted RBP19.36■□□□□ 0.69
TMEM53-209ENST00000495630 HCFC1R1Q9NWW0 138 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 ZSCAN32Q9NX65 697 aa19.36■□□□□ 0.69
TMEM53-209ENST00000495630 MRPS23Q9Y3D9 190 aaKnown RBP19.36■□□□□ 0.69
TMEM53-209ENST00000495630 DOCK6Q96HP0 2047 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 GPR179Q6PRD1 2367 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 BTBD18B2RXH4 712 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 TRAPPC3O43617 180 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 PRKCBP05771 671 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 CYP11B2P19099 503 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 CD72P21854 359 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 RPS9P46781 194 aaKnown RBP19.35■□□□□ 0.69
TMEM53-209ENST00000495630 RSPO4Q2I0M5 234 aaPredicted RBP19.35■□□□□ 0.69
TMEM53-209ENST00000495630 ZNF852Q6ZMS4 543 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 ANKS3Q6ZW76 656 aa19.35■□□□□ 0.69
TMEM53-209ENST00000495630 NELL1Q92832 810 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms