RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 EXOC3O60645 756 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 IL18RAPO95256 599 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 NR3C1P04150 777 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 RB1P06400 928 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 KCNE1P15382 129 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 BMPR1AP36894 532 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 TNFSF9P41273 254 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 ALDH7A1P49419 539 aaKnown RBP18.6■□□□□ 0.57
HDAC6-235ENST00000495515 AFF1P51825 1210 aaKnown RBP18.6■□□□□ 0.57
HDAC6-235ENST00000495515 ENOX2Q16206 610 aaKnown RBP18.6■□□□□ 0.57
HDAC6-235ENST00000495515 NFIL3Q16649 462 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 EDRF1Q3B7T1 1238 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 ZBTB41Q5SVQ8 909 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 ALKAL1Q6UXT8 129 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 LRRC55Q6ZSA7 311 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 MLKLQ8NB16 471 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 GSTCDQ8NEC7 633 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 ZNF558Q96NG5 402 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 TMEM175Q9BSA9 504 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 ASB7Q9H672 318 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 CWH43Q9H720 699 aa18.6■□□□□ 0.57
HDAC6-235ENST00000495515 RBAKQ9NYW8 714 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-235ENST00000495515 SZT2Q5T011 3432 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 PTPRSQ13332 1948 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 SMIM28A0A1B0GU29 152 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 TTC26A0AVF1 554 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 GOLGA8IPA6NC78 632 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 GOLGA8JA6NMD2 632 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 PTGESO14684 152 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 ZC3H11AO75152 810 aaKnown RBP eCLIP18.59■□□□□ 0.57
HDAC6-235ENST00000495515 ALDH2P05091 517 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 CTNNB1P35222 781 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 PPM1AP35813 382 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 SURF1Q15526 300 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 CENPPQ6IPU0 288 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 CRELD2Q6UXH1 353 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-235ENST00000495515 BRSK2Q8IWQ3 736 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 P2RX5Q93086 422 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 FAM212AQ96EL1 285 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 FBXL18Q96ME1 805 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 NRDE2Q9H7Z3 1164 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 MIOSQ9NXC5 875 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 DACH1Q9UI36 760 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 FRMD4BQ9Y2L6 1034 aa18.59■□□□□ 0.57
HDAC6-235ENST00000495515 BICDL2A1A5D9 508 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 LACTBL1A8MY62 500 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 ADRB2P07550 413 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 BMP6P22004 513 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 NR2F2P24468 414 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 CCNE1P24864 410 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 DSC1Q08554 894 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 TUSC3Q13454 348 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 SNRNP35Q16560 246 aaKnown RBP18.58■□□□□ 0.56
HDAC6-235ENST00000495515 EPC2Q52LR7 807 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 GLRA4Q5JXX5 417 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 KLHL10Q6JEL2 608 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 CAVIN1Q6NZI2 390 aaKnown RBP18.58■□□□□ 0.56
HDAC6-235ENST00000495515 SASS6Q6UVJ0 657 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 KCNT2Q6UVM3 1135 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 RBM43Q6ZSC3 357 aaKnown RBP18.58■□□□□ 0.56
HDAC6-235ENST00000495515 NT5DC4Q86YG4 428 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 ZNF280BQ86YH2 543 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 COLGALT1Q8NBJ5 622 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 FBXO22Q8NEZ5 403 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 ARNTL2Q8WYA1 636 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 PPP1R10Q96QC0 940 aaKnown RBP18.58■□□□□ 0.56
HDAC6-235ENST00000495515 C17orf80Q9BSJ5 609 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 C11orf84Q9BUA3 381 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-235ENST00000495515 SEMA6BQ9H3T3 888 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 DMAC2Q9NW81 257 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 MTUS1Q9ULD2 1270 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 DERAQ9Y315 318 aa18.58■□□□□ 0.56
HDAC6-235ENST00000495515 LAMA3Q16787 3333 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 PPP1R3GB7ZBB8 358 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 C5orf67F2Z3F1 127 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 TULP1O00294 542 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-235ENST00000495515 DDHD2O94830 711 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 ARHGEF15O94989 841 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 BCAR1P56945 870 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 NLRP12P59046 1061 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 PAK1Q13153 545 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 ADAM9Q13443 819 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 ZCWPW2Q504Y3 356 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 FOXR2Q6PJQ5 311 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 CBWD2Q8IUF1 395 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 COLGALT2Q8IYK4 626 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 NELFBQ8WX92 580 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 KIF12Q96FN5 646 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 UROC1Q96N76 676 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 SPG21Q9NZD8 308 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 UBQLN1Q9UMX0 589 aaKnown RBP18.57■□□□□ 0.56
HDAC6-235ENST00000495515 PLAGL2Q9UPG8 496 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 FAN1Q9Y2M0 1017 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 C2CD2Q9Y426 696 aa18.57■□□□□ 0.56
HDAC6-235ENST00000495515 CETN3O15182 167 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 LETM1O95202 739 aaPredicted RBP18.56■□□□□ 0.56
HDAC6-235ENST00000495515 GALTP07902 379 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 LINC00271P0C7V0 271 aa18.56■□□□□ 0.56
HDAC6-235ENST00000495515 CD44P16070 742 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms