RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 KCNH3Q9ULD8 1083 aa10.07□□□□□ -0.8
GARNL3-219ENST00000495172 SLC8A2Q9UPR5 921 aa10.07□□□□□ -0.8
GARNL3-219ENST00000495172 PCDHB2Q9Y5E7 798 aa10.07□□□□□ -0.8
GARNL3-219ENST00000495172 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
GARNL3-219ENST00000495172 TNRC6BQ9UPQ9 1833 aaKnown RBP10.07□□□□□ -0.8
GARNL3-219ENST00000495172 LRRK2Q5S007 2527 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 COL1A2P08123 1366 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 ZNF316A6NFI3 1004 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-219ENST00000495172 SH3BP5O60239 455 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 RAB11FIP3O75154 756 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 AKAP3O75969 853 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 ATG7O95352 703 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 CD59P13987 128 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 SCNN1GP51170 649 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 TNK2Q07912 1038 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 USP41Q3LFD5 358 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 DGKKQ5KSL6 1271 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 NAIF1Q69YI7 327 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-219ENST00000495172 ABHD15Q6UXT9 468 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 MFSD6Q6ZSS7 791 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 CEP57Q86XR8 500 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 HS6ST3Q8IZP7 471 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 SAMD3Q8N6K7 520 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 PANK1Q8TE04 598 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 TNPO1Q92973 898 aaKnown RBP10.06□□□□□ -0.8
GARNL3-219ENST00000495172 ZFP42Q96MM3 310 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 LRRC3BQ96PB8 259 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 MAP7D2Q96T17 732 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 CORO1BQ9BR76 489 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 PAAF1Q9BRP4 392 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 FZD8Q9H461 694 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 ZNF302Q9NR11 478 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
GARNL3-219ENST00000495172 A0A087WZ62 844 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 MYBPHLA2RUH7 354 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 ANTXRLA6NF34 631 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 HEPACAM2A8MVW5 462 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 SLC28A2O43868 658 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 ZNF862O60290 1169 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 NTRK1P04629 796 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 IGFBP6P24592 240 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-219ENST00000495172 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.8
GARNL3-219ENST00000495172 RDXP35241 583 aaKnown RBP10.05□□□□□ -0.8
GARNL3-219ENST00000495172 LY6DQ14210 128 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 TRIP6Q15654 476 aaKnown RBP10.05□□□□□ -0.8
GARNL3-219ENST00000495172 PRSS36Q5K4E3 855 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 HIST2H2BCQ6DN03 193 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-219ENST00000495172 KSR1Q8IVT5 923 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 SCUBE3Q8IX30 993 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 FRMD1Q8N878 549 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 CSGALNACT1Q8TDX6 532 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 CDHR1Q96JP9 859 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 PGBD1Q96JS3 809 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 ZSCAN10Q96SZ4 725 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-219ENST00000495172 GAD1Q99259 594 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 FDXACB1Q9BRP7 624 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-219ENST00000495172 TRPV5Q9NQA5 729 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 HES2Q9Y543 173 aa10.05□□□□□ -0.8
GARNL3-219ENST00000495172 HELZP42694 1942 aaKnown RBP10.05□□□□□ -0.8
GARNL3-219ENST00000495172 CCDC163A0A0D9SF12 145 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-219ENST00000495172 MLH1P40692 756 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 DSC1Q08554 894 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 ALX1Q15699 326 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 UBXN11Q5T124 520 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 LNX1Q8TBB1 728 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-219ENST00000495172 OTUD7AQ8TE49 926 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-219ENST00000495172 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 SH2D3AQ9BRG2 576 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 SDF4Q9BRK5 362 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 RIOX1Q9H6W3 641 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 SENP2Q9HC62 589 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.04□□□□□ -0.8
GARNL3-219ENST00000495172 STK39Q9UEW8 545 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 TSC2P49815 1807 aa10.04□□□□□ -0.8
GARNL3-219ENST00000495172 PNMA6FA0A0J9YX94 578 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 TMEM150BA6NC51 233 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 CAPN9O14815 690 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 TLX3O43711 291 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-219ENST00000495172 ZNF623O75123 536 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 RNF40O75150 1001 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 MOSPD3O75425 235 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 CFIP05156 583 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 HOXA9P31269 272 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 OR1D2P34982 312 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 PTGER3P43115 390 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 DGKEP52429 567 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 PSMD5Q16401 504 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 FAM160B1Q5W0V3 765 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 FSTL4Q6MZW2 842 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 ZNF589Q86UQ0 364 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-219ENST00000495172 DAGLBQ8NCG7 672 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 SMG8Q8ND04 991 aaKnown RBP10.03□□□□□ -0.8
GARNL3-219ENST00000495172 ZSCAN18Q8TBC5 510 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-219ENST00000495172 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 ESR2Q92731 530 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 SMARCD2Q92925 531 aa10.03□□□□□ -0.8
GARNL3-219ENST00000495172 TRAIPQ9BWF2 469 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms