RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	TARS2	Q9BW92	718 aa	Known RBP	11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	PARVG	Q9HBI0	331 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	C11orf16	Q9NQ32	467 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	SLC38A7	Q9NVC3	462 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	CNTN3	Q9P232	1028 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	CCDC39	Q9UFE4	941 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	USP20	Q9Y2K6	914 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	GTF3C3	Q9Y5Q9	886 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	DENND4A	Q7Z401	1863 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	SMIM28	A0A1B0GU29	152 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891		F8W810	466 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	TEX28	O15482	410 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	PPP6R2	O75170	966 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	SSB	P05455	408 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	ADRB2	P07550	413 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	EPCAM	P16422	314 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	HOXD11	P31277	338 aa	Predicted RBP	11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	YARS	P54577	528 aa	Known RBP	11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	GTF2B	Q00403	316 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	POU5F1	Q01860	360 aa	Known RBP	11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	MCM6	Q14566	821 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	UPP1	Q16831	310 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	LLGL2	Q6P1M3	1020 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	LILRA6	Q6PI73	481 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	ELMSAN1	Q6PJG2	1045 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	DCLRE1A	Q6PJP8	1040 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	USP49	Q70CQ1	688 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	HAUS6	Q7Z4H7	955 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	KRI1	Q8N9T8	703 aa	Known RBP	11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	TMEM87A	Q8NBN3	555 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	LINC00301	Q8NCQ3	95 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	PIK3R5	Q8WYR1	880 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	DDX27	Q96GQ7	796 aa	Known RBP	11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	EPSTI1	Q96J88	318 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	SNX27	Q96L92	541 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	RIPOR3	Q96MK2	946 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	ACAP3	Q96P50	834 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	PLIN2	Q99541	437 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	CXCL16	Q9H2A7	254 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	PLEKHA4	Q9H4M7	779 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	SFXN1	Q9H9B4	322 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	PLEKHA5	Q9HAU0	1116 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	SEL1L	Q9UBV2	794 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	UST	Q9Y2C2	406 aa		11.26	□□□□□ -0.61
NEPRO-222	ENST00000494891	PDCD11	Q14690	1871 aa	Known RBP	11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	TRAK2	O60296	914 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	FAM189A1	O60320	539 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	TADA2A	O75478	443 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	KIF4A	O95239	1232 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	YEATS4	O95619	227 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	LIG1	P18858	919 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	KLRC2	P26717	231 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	MARCKS	P29966	332 aa	Predicted RBP	11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	RPL9	P32969	192 aa	Known RBP	11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	TXLNA	P40222	546 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	RAD51AP2	Q09MP3	1159 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	TMEM31	Q5JXX7	168 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	ATL3	Q6DD88	541 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	FAM173B	Q6P4H8	233 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	CD300LG	Q6UXG3	332 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	CCDC73	Q6ZRK6	1079 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	RTL10	Q7L3V2	364 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	GPR149	Q86SP6	731 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	RNF135	Q8IUD6	432 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	MAP4K3	Q8IVH8	894 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	HSCB	Q8IWL3	235 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	CEP120	Q8N960	986 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	HVCN1	Q96D96	273 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	PAAF1	Q9BRP4	392 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	TTPAL	Q9BTX7	342 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	STRA6	Q9BX79	667 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	TBX20	Q9UMR3	447 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	GDA	Q9Y2T3	454 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	NR2E1	Q9Y466	385 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	VWA8	A3KMH1	1905 aa		11.25	□□□□□ -0.61
NEPRO-222	ENST00000494891	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	FRMD3	A2A2Y4	597 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	PRR33	A8MZF0	331 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	CLDN3	O15551	220 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	MEFV	O15553	781 aa	Predicted RBP	11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	TRAPPC3	O43617	180 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	PPP1R37	O75864	691 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	FAM13A	O94988	1023 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	GLUD1	P00367	558 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	CLTA	P09496	248 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	FGFR3	P22607	806 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	SLC10A6	Q3KNW5	377 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	ATAT1	Q5SQI0	421 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	MYCT1	Q8N699	235 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	LNX1	Q8TBB1	728 aa	Predicted RBP	11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	DNAJC19	Q96DA6	116 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZNF396	Q96N95	335 aa	Predicted RBP	11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZMAT2	Q96NC0	199 aa	Known RBP	11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	CLIC6	Q96NY7	704 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	TCHP	Q9BT92	498 aa		11.24	□□□□□ -0.61
NEPRO-222	ENST00000494891	LRFN3	Q9BTN0	628 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms