RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CORO7P57737 925 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 KRT71Q3SY84 523 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 C2CD6Q53TS8 623 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 CATSPERGQ6ZRH7 1159 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 FBXO25Q8TCJ0 367 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 MORC4Q8TE76 937 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 CPA5Q8WXQ8 436 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 FNBP1Q96RU3 617 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 PPANQ9NQ55 473 aaKnown RBP12.02□□□□□ -0.49
CHMP3-209ENST00000494623 ZNF112Q9UJU3 913 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 ADAMTS5Q9UNA0 930 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 PCDHA3Q9Y5H8 950 aa12.02□□□□□ -0.49
CHMP3-209ENST00000494623 SPATA31C2B4DYI2 1134 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 PEX10O60683 326 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 RARAP10276 462 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 HSPA6P17066 643 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 OAZ1P54368 228 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 WNT7BP56706 349 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 FSTL1Q12841 308 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-209ENST00000494623 BIRC3Q13489 604 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 XKR3Q5GH77 459 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 SLC13A5Q86YT5 568 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-209ENST00000494623 CDHR1Q96JP9 859 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 ZBTB45Q96K62 511 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-209ENST00000494623 EPN3Q9H201 632 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 C1orf112Q9NSG2 853 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 UVRAGQ9P2Y5 699 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 MTUS1Q9ULD2 1270 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 FAM169AQ9Y6X4 670 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 C19orf81C9J6K1 198 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 EXTL3O43909 919 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 SUPT20HL2P0C7V6 817 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 SCP2P22307 547 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 TMOD1P28289 359 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 RPL21P46778 160 aaKnown RBP12.01□□□□□ -0.49
CHMP3-209ENST00000494623 PMS2P54278 862 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 RWDD2BP57060 319 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 NLRP11P59045 1033 aaKnown RBP12.01□□□□□ -0.49
CHMP3-209ENST00000494623 STRN3Q13033 797 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 PTGISQ16647 500 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 CLEC16AQ2KHT3 1053 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 SUPT20HL1Q3ZLR7 823 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 WDR44Q5JSH3 913 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 ZDHHC24Q6UX98 284 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 SEPT14Q6ZU15 432 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 ARFGAP2Q8N6H7 521 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 FAM107BQ9H098 131 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 ARHGAP28Q9P2N2 729 aa12.01□□□□□ -0.49
CHMP3-209ENST00000494623 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 NFASCO94856 1347 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 SHBGP04278 402 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 ATP4AP20648 1035 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 MAPK4P31152 587 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
CHMP3-209ENST00000494623 MAGOHP61326 146 aaKnown RBP12□□□□□ -0.49
CHMP3-209ENST00000494623 EMC2Q15006 297 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
CHMP3-209ENST00000494623 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 TRIM7Q9C029 511 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 TSPYL1Q9H0U9 437 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12□□□□□ -0.49
CHMP3-209ENST00000494623 ANAPC7Q9UJX3 599 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 TLDC2A0PJX2 215 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 LRRIQ4A6NIV6 560 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 E7EVH7 732 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 PODXLO00592 558 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 CLDN3O15551 220 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 GGPS1O95749 300 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 COILP38432 576 aaPredicted RBP12□□□□□ -0.49
CHMP3-209ENST00000494623 DRG2P55039 364 aaKnown RBP12□□□□□ -0.49
CHMP3-209ENST00000494623 RTP1P59025 263 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 CNTN2Q02246 1040 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 GCNT1Q02742 428 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 AGBL2Q5U5Z8 902 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 LLGL2Q6P1M3 1020 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 UHMK1Q8TAS1 419 aaKnown RBP12□□□□□ -0.49
CHMP3-209ENST00000494623 ZNF302Q9NR11 478 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 HOXC10Q9NYD6 342 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 GRHL1Q9NZI5 618 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 PCYOX1Q9UHG3 505 aa12□□□□□ -0.49
CHMP3-209ENST00000494623 AGO2Q9UKV8 859 aaKnown RBP12□□□□□ -0.49
CHMP3-209ENST00000494623 K7ERI5 159 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 HLA-DRAP01903 254 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 PIK3CAP42336 1068 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 PPP2R2AP63151 447 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 SNX1Q13596 522 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 STXBP2Q15833 593 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 ENOSF1Q7L5Y1 443 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 NLRP14Q86W24 1093 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 ANKRD35Q8N283 1001 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 DEPTORQ8TB45 409 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
CHMP3-209ENST00000494623 C1orf54Q8WWF1 131 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms