RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 OR1D2P34982 312 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 ARPP19P56211 112 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 GPC5P78333 572 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 ELAVL2Q12926 359 aaKnown RBP10.62□□□□□ -0.71
UBR4-216ENST00000494503 ZNF174Q15697 407 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 AXDND1Q5T1B0 1012 aaPredicted RBP10.62□□□□□ -0.71
UBR4-216ENST00000494503 PDXDC1Q6P996 788 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 PADI6Q6TGC4 694 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 PARM1Q6UWI2 310 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 MTSS1LQ765P7 747 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 CATSPER3Q86XQ3 398 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 FGF14Q92915 247 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 TNFRSF25Q93038 417 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 KXD1Q9BQD3 176 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 RPP25Q9BUL9 199 aaKnown RBP10.62□□□□□ -0.71
UBR4-216ENST00000494503 TMEM60Q9H2L4 133 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 POLD4Q9HCU8 107 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 TUFT1Q9NNX1 390 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 SPATA6Q9NWH7 488 aaPredicted RBP10.62□□□□□ -0.71
UBR4-216ENST00000494503 FBXW11Q9UKB1 542 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 CDH7Q9ULB5 785 aa10.62□□□□□ -0.71
UBR4-216ENST00000494503 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 I3L4J1 428 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 PTGESO14684 152 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 ADAM12O43184 909 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 LRRN2O75325 713 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 HNRNPA1P09651 372 aaKnown RBP eCLIP10.61□□□□□ -0.71
UBR4-216ENST00000494503 OR52Z1P0C646 297 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 HARSP12081 509 aaKnown RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 CCT6AP40227 531 aaKnown RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 NEK4P51957 841 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 YARSP54577 528 aaKnown RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 OSTNP61366 133 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 PPP2R5AQ15172 486 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 DCAF4L1Q3SXM0 396 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 PABPC1LQ4VXU2 614 aaKnown RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 CDCA2Q69YH5 1023 aaPredicted RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 LILRA6Q6PI73 481 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 APBB1IPQ7Z5R6 666 aaPredicted RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 C1orf210Q8IVY1 113 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 NSUN7Q8NE18 718 aaKnown RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 PJA1Q8NG27 643 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 ITFG1Q8TB96 612 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 LNX1Q8TBB1 728 aaPredicted RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 PIK3R5Q8WYR1 880 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 BSNDQ8WZ55 320 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 FGF13Q92913 245 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 CLSTN3Q9BQT9 956 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 BCO2Q9BYV7 579 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 RHOBTB2Q9BYZ6 727 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 HCFC1R1Q9NWW0 138 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 MRPS23Q9Y3D9 190 aaKnown RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 CDY1Q9Y6F8 540 aa10.61□□□□□ -0.71
UBR4-216ENST00000494503 ZFP37Q9Y6Q3 630 aaPredicted RBP10.61□□□□□ -0.71
UBR4-216ENST00000494503 COL4A3Q01955 1670 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 CITO14578 2027 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 ANHXE9PGG2 379 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 PRRG1O14668 218 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 LAMTOR5O43504 91 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 KINO60870 393 aaKnown RBP10.6□□□□□ -0.71
UBR4-216ENST00000494503 EFEMP2O95967 443 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 LRG1P02750 347 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 SP9P0CG40 484 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 SPATA31C1P0DKV0 1188 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 XRCC6P12956 609 aaKnown RBP eCLIP10.6□□□□□ -0.71
UBR4-216ENST00000494503 CD72P21854 359 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 ELF1P32519 619 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 NAMPTP43490 491 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 CLCNKBP51801 687 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 ANAPC15P60006 121 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 ZRSR1Q15695 479 aaKnown RBP10.6□□□□□ -0.71
UBR4-216ENST00000494503 MLF2Q15773 248 aaPredicted RBP10.6□□□□□ -0.71
UBR4-216ENST00000494503 ATF7IP2Q5U623 682 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 EEF1DP3Q658K8 133 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 HAUS3Q68CZ6 603 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 PHLDB3Q6NSJ2 640 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.6□□□□□ -0.71
UBR4-216ENST00000494503 ERMP1Q7Z2K6 904 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 C8orf76Q96K31 380 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 MTMR9Q96QG7 549 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 CXCL16Q9H2A7 254 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 SEMA4AQ9H3S1 761 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 FZD8Q9H461 694 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 GOLGA2P5Q9HBQ8 144 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 SLC2A4RGQ9NR83 387 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 ZMYM2Q9UBW7 1377 aa10.6□□□□□ -0.71
UBR4-216ENST00000494503 KANSL1LA0AUZ9 987 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 K7ERI5 159 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 ACKR2O00590 384 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 TRAPPC3O43617 180 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 CYP11B2P19099 503 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 KCNA4P22459 653 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 TKTP29401 623 aaKnown RBP10.59□□□□□ -0.71
UBR4-216ENST00000494503 PFKPQ01813 784 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 CSTF1Q05048 431 aaKnown RBP10.59□□□□□ -0.71
UBR4-216ENST00000494503 FAM187BQ17R55 369 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 ZNF568Q3ZCX4 644 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 TPRG1Q6ZUI0 275 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 DGLUCYQ7Z3D6 616 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms