RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GJB1P08034 283 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 MCF2P10911 925 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 STAT1P42224 750 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 ACOT2P49753 483 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 PTK2Q05397 1052 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 PRKCZQ05513 592 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 CACNB2Q08289 660 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 BMS1Q14692 1282 aaKnown RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 DRAP1Q14919 205 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 KYAT1Q16773 422 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 ZBTB41Q5SVQ8 909 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 ATF7IP2Q5U623 682 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 NFRKBQ6P4R8 1299 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 GJB7Q6PEY0 223 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 ZNF571Q7Z3V5 609 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 WDR49Q8IV35 697 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 RNF10Q8N5U6 811 aaKnown RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 ZNF784Q8NCA9 323 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 KIF18AQ8NI77 898 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 TAS1R2Q8TE23 839 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 DHX38Q92620 1227 aaKnown RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 ZBTB10Q96DT7 871 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 C16orf45Q96MC5 204 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 PCMTD1Q96MG8 357 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 POP1Q99575 1024 aaKnown RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 CGRRF1Q99675 332 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 FDXACB1Q9BRP7 624 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 MSTO1Q9BUK6 570 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 KATNAL1Q9BW62 490 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 AP5M1Q9H0R1 490 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 FAM124BQ9H5Z6 455 aaPredicted RBP7.35□□□□□ -1.23
MSH5-217ENST00000494458 VRTNQ9H8Y1 702 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 SETD4Q9NVD3 440 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 SAGE1Q9NXZ1 904 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 PCDHA13Q9Y5I0 950 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 SCN10AQ9Y5Y9 1956 aa7.35□□□□□ -1.23
MSH5-217ENST00000494458 A0A087X0T9 212 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 A0A0A6YYK5 440 aaPredicted RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 MYADML2A6NDP7 307 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 DDX3XO00571 662 aaKnown RBP eCLIP7.34□□□□□ -1.23
MSH5-217ENST00000494458 B4GALT5O43286 388 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 CTIFO43310 598 aaKnown RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 ZEB2O60315 1214 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 TSPAN1O60635 241 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 IL18RAPO95256 599 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 TBC1D8O95759 1140 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 STAU1O95793 577 aaKnown RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 RPLP2P05387 115 aaKnown RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 CLTAP09496 248 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 CCDC172P0C7W6 258 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 FAM228BP0C875 321 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 GZMAP12544 262 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 DARSP14868 501 aaKnown RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 ARF4P18085 180 aaPredicted RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 ACO1P21399 889 aaKnown RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 HOXD10P28358 340 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 AXLP30530 894 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 VEGFBP49765 207 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 PRMT2P55345 433 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 AMPD2Q01433 879 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 KLHL30Q0D2K2 578 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 TUBB2AQ13885 445 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 NAB2Q15742 525 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 ENOX2Q16206 610 aaKnown RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 ASIC2Q16515 512 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 XKR4Q5GH76 650 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 TDRD10Q5VZ19 366 aaKnown RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 EEF1DP3Q658K8 133 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 ALKAL1Q6UXT8 129 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 NT5DC4Q86YG4 428 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 ARHGEF19Q8IW93 802 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 METTL13Q8N6R0 699 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 MYRIPQ8NFW9 859 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 DDX1Q92499 740 aaKnown RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 BICD1Q96G01 975 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 SPAG5Q96R06 1193 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 WDR24Q96S15 920 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 TSPAN18Q96SJ8 248 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 MAP7D2Q96T17 732 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 MTG1Q9BT17 334 aaPredicted RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 TUBB2BQ9BVA1 445 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 IRX2Q9BZI1 471 aaPredicted RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 TSGA10Q9BZW7 698 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 XYLT2Q9H1B5 865 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 ISCUQ9H1K1 167 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 CDT1Q9H211 546 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 PDZD7Q9H5P4 517 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 ASB7Q9H672 318 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 PDE11AQ9HCR9 933 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 UBE2TQ9NPD8 197 aaPredicted RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 TOPORSQ9NS56 1045 aaPredicted RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 RBAKQ9NYW8 714 aaPredicted RBP7.34□□□□□ -1.23
MSH5-217ENST00000494458 ADAMTS1Q9UHI8 967 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 NAGPAQ9UK23 515 aa7.34□□□□□ -1.23
MSH5-217ENST00000494458 GRIN2DO15399 1336 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 INO80B-WBP1J3KQ70 363 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 TREHO43280 583 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 KRT86O43790 486 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 ASS1P00966 412 aaKnown RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 HLA-DRAP01903 254 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms