RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 ANKMY2Q8IV38 441 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 SLFN12Q8IYM2 578 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 PGBD4Q96DM1 585 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 TMEM169Q96HH4 297 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 MSLNLQ96KJ4 702 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 CCDC43Q96MW1 224 aaKnown RBP8.42□□□□□ -1.06
RBM39-238ENST00000493853 MBOAT7Q96N66 472 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 CYP26B1Q9NR63 512 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 HCN2Q9UL51 889 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 TPCN1Q9ULQ1 816 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 BARX2Q9UMQ3 279 aaPredicted RBP8.42□□□□□ -1.06
RBM39-238ENST00000493853 PPME1Q9Y570 386 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 PCDHGC5Q9Y5F6 944 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 DOCK5Q9H7D0 1870 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 PTPRSQ13332 1948 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 TCF20Q9UGU0 1960 aaKnown RBP8.42□□□□□ -1.06
RBM39-238ENST00000493853 MICAL3Q7RTP6 2002 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 REV3LO60673 3130 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 SIP14410 1827 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 COL4A4P53420 1690 aaPredicted RBP8.41□□□□□ -1.06
RBM39-238ENST00000493853 STK36Q9NRP7 1315 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 IGKV6-21A0A0C4DH24 114 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 NT5C1B-RDH14C9J2C7 533 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 EFSO43281 561 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 ZC3H11AO75152 810 aaKnown RBP eCLIP8.41□□□□□ -1.06
RBM39-238ENST00000493853 CXCL14O95715 111 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 EPXP11678 715 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 RFX1P22670 979 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 ADH6P28332 368 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 YWHABP31946 246 aaKnown RBP8.41□□□□□ -1.06
RBM39-238ENST00000493853 PBX3P40426 434 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 TECP42680 631 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 RAB27AP51159 221 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 NEK4P51957 841 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 AK2P54819 239 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 NPEPPSP55786 919 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 COASYQ13057 564 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 DRP2Q13474 957 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 SMC1AQ14683 1233 aaKnown RBP8.41□□□□□ -1.06
RBM39-238ENST00000493853 EPHA7Q15375 998 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 NPY5RQ15761 445 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 PLA2G4FQ68DD2 849 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 LLGL2Q6P1M3 1020 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 B3GNT9Q6UX72 402 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 LRRC55Q6ZSA7 311 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 ANO5Q75V66 913 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 KSR1Q8IVT5 923 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 TPH2Q8IWU9 490 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 SMRP1Q8NCR6 262 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 URGCPQ8TCY9 931 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 TCP11Q8WWU5 503 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 PRPF31Q8WWY3 499 aaKnown RBP8.41□□□□□ -1.06
RBM39-238ENST00000493853 PSPC1Q8WXF1 523 aaKnown RBP8.41□□□□□ -1.06
RBM39-238ENST00000493853 RSPH1Q8WYR4 309 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 RPGRIP1Q96KN7 1286 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 ZSWIM4Q9H7M6 989 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 KCNMB3Q9NPA1 279 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 GJB4Q9NTQ9 266 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 CLEC1BQ9P126 229 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 PCDHA12Q9UN75 941 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 INPP5FQ9Y2H2 1132 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 USP15Q9Y4E8 981 aaPredicted RBP8.41□□□□□ -1.06
RBM39-238ENST00000493853 COL4A3BPQ9Y5P4 624 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 KAT6AQ92794 2004 aa8.41□□□□□ -1.06
RBM39-238ENST00000493853 ASAP2O43150 1006 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 GAS2O43903 313 aaKnown RBP8.4□□□□□ -1.06
RBM39-238ENST00000493853 DTNBO60941 627 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 ERLIN2O94905 339 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 STBD1O95210 358 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 HOXB8P17481 243 aaPredicted RBP8.4□□□□□ -1.06
RBM39-238ENST00000493853 BCAR1P56945 870 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 SNRPNP63162 240 aaKnown RBP8.4□□□□□ -1.06
RBM39-238ENST00000493853 CYP4A11Q02928 519 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 SAFBQ15424 915 aaKnown RBP eCLIP8.4□□□□□ -1.06
RBM39-238ENST00000493853 CALCRLQ16602 461 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 DUSP6Q16828 381 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 NOMO2Q5JPE7 1267 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 CLLU1OSQ5K130 101 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 ERICH6BQ5W0A0 696 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 CES5AQ6NT32 575 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 SRGAP1Q7Z6B7 1085 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 C4orf19Q8IY42 314 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 VPS52Q8N1B4 723 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 MRPL43Q8N983 215 aaKnown RBP8.4□□□□□ -1.06
RBM39-238ENST00000493853 NECAB1Q8N987 351 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 CASP10Q92851 521 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 LPPQ93052 612 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 TMEM143Q96AN5 459 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 DYDC2Q96IM9 177 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 HSH2DQ96JZ2 352 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 MFSD14AQ96MC6 490 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 FAM193BQ96PV7 902 aaPredicted RBP8.4□□□□□ -1.06
RBM39-238ENST00000493853 LXNQ9BS40 222 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
RBM39-238ENST00000493853 TRAIPQ9BWF2 469 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 APOL5Q9BWW9 433 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 PHF7Q9BWX1 381 aaPredicted RBP8.4□□□□□ -1.06
RBM39-238ENST00000493853 GBP3Q9H0R5 595 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 C11orf16Q9NQ32 467 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms