RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 ARHGEF3Q9NR81 526 aa19.18■□□□□ 0.66
COL9A1-210ENST00000493682 SLC2A4RGQ9NR83 387 aa19.18■□□□□ 0.66
COL9A1-210ENST00000493682 ZFP37Q9Y6Q3 630 aaPredicted RBP19.18■□□□□ 0.66
COL9A1-210ENST00000493682 ARHGEF35A5YM69 484 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 ADAM12O43184 909 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 NAMPTP43490 491 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 NTHL1P78549 312 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 SAFBQ15424 915 aaKnown RBP eCLIP19.17■□□□□ 0.66
COL9A1-210ENST00000493682 PPM1LQ5SGD2 360 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 LIN9Q5TKA1 542 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 EEF1DP3Q658K8 133 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 ADPGKQ9BRR6 497 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 RPP25Q9BUL9 199 aaKnown RBP19.17■□□□□ 0.66
COL9A1-210ENST00000493682 CDH7Q9ULB5 785 aa19.17■□□□□ 0.66
COL9A1-210ENST00000493682 RIF1Q5UIP0 2472 aaKnown RBP19.16■□□□□ 0.66
COL9A1-210ENST00000493682 C8AP07357 584 aa19.16■□□□□ 0.66
COL9A1-210ENST00000493682 DCNP07585 359 aaKnown RBP19.16■□□□□ 0.66
COL9A1-210ENST00000493682 OR52Z1P0C646 297 aa19.16■□□□□ 0.66
COL9A1-210ENST00000493682 ELAVL2Q12926 359 aaKnown RBP19.16■□□□□ 0.66
COL9A1-210ENST00000493682 ZNF174Q15697 407 aa19.16■□□□□ 0.66
COL9A1-210ENST00000493682 DCLRE1AQ6PJP8 1040 aa19.16■□□□□ 0.66
COL9A1-210ENST00000493682 PARM1Q6UWI2 310 aa19.16■□□□□ 0.66
COL9A1-210ENST00000493682 KIFC3Q9BVG8 833 aa19.16■□□□□ 0.66
COL9A1-210ENST00000493682 GDAQ9Y2T3 454 aa19.16■□□□□ 0.66
COL9A1-210ENST00000493682 SIT1Q9Y3P8 196 aa19.16■□□□□ 0.66
COL9A1-210ENST00000493682 HOXA9P31269 272 aa19.15■□□□□ 0.66
COL9A1-210ENST00000493682 PPP2R5AQ15172 486 aa19.15■□□□□ 0.66
COL9A1-210ENST00000493682 SPECC1Q5M775 1068 aa19.15■□□□□ 0.66
COL9A1-210ENST00000493682 PDXDC1Q6P996 788 aa19.15■□□□□ 0.66
COL9A1-210ENST00000493682 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.15■□□□□ 0.66
COL9A1-210ENST00000493682 FGF14Q92915 247 aa19.15■□□□□ 0.66
COL9A1-210ENST00000493682 POLD4Q9HCU8 107 aa19.15■□□□□ 0.66
COL9A1-210ENST00000493682 DLGAP2Q9P1A6 1054 aa19.15■□□□□ 0.66
COL9A1-210ENST00000493682 FAM186AA6NE01 2351 aa19.15■□□□□ 0.66
COL9A1-210ENST00000493682 CCL16O15467 120 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 XYLBO75191 536 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 FGFR3P22607 806 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 IGFBP6P24592 240 aaPredicted RBP19.14■□□□□ 0.65
COL9A1-210ENST00000493682 GPC5P78333 572 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 FOXK2Q01167 660 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 ORC2Q13416 577 aaPredicted RBP19.14■□□□□ 0.65
COL9A1-210ENST00000493682 RAB33AQ14088 237 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 ECM1Q16610 540 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 DCAF4L1Q3SXM0 396 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 AXDND1Q5T1B0 1012 aaPredicted RBP19.14■□□□□ 0.65
COL9A1-210ENST00000493682 SLC7A14Q8TBB6 771 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 FGF13Q92913 245 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 POLIQ9UNA4 740 aa19.14■□□□□ 0.65
COL9A1-210ENST00000493682 TMEM189-UBE2V1I3L0A0 370 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 B3GAT3O94766 335 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 MUTP22033 750 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 OR1D2P34982 312 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 RBM25P49756 843 aaKnown RBP19.13■□□□□ 0.65
COL9A1-210ENST00000493682 EFNA5P52803 228 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 GLRA4Q5JXX5 417 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 NT5DC1Q5TFE4 455 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 PJA1Q8NG27 643 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 ITFG1Q8TB96 612 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 KCNG4Q8TDN1 519 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 C8orf76Q96K31 380 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 IFT74Q96LB3 600 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 PPP1R10Q96QC0 940 aaKnown RBP19.13■□□□□ 0.65
COL9A1-210ENST00000493682 FOXQ1Q9C009 403 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 FOXP1Q9H334 677 aaPredicted RBP19.13■□□□□ 0.65
COL9A1-210ENST00000493682 SEMA4AQ9H3S1 761 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 MTRRQ9UBK8 725 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 R4GN57 208 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 DOCK6Q96HP0 2047 aa19.13■□□□□ 0.65
COL9A1-210ENST00000493682 SPTBN4Q9H254 2564 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 VWA8A3KMH1 1905 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 POU2F2P09086 479 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 CCT6AP40227 531 aaKnown RBP19.12■□□□□ 0.65
COL9A1-210ENST00000493682 CLCNKBP51801 687 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 STARD6P59095 220 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 UVSSAQ2YD98 709 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 TTC38Q5R3I4 469 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 ATF7IP2Q5U623 682 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 HAUS3Q68CZ6 603 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 CD300LGQ6UXG3 332 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 RSPO2Q6UXX9 243 aaPredicted RBP19.12■□□□□ 0.65
COL9A1-210ENST00000493682 MTSS1LQ765P7 747 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 KIFAP3Q92845 792 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 BHMT2Q9H2M3 363 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 HCFC1R1Q9NWW0 138 aa19.12■□□□□ 0.65
COL9A1-210ENST00000493682 DAXXQ9UER7 740 aaPredicted RBP19.12■□□□□ 0.65
COL9A1-210ENST00000493682 LMNAP02545 664 aaKnown RBP19.11■□□□□ 0.65
COL9A1-210ENST00000493682 GLULP15104 373 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 FXR2P51116 673 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL9A1-210ENST00000493682 UPP1Q16831 310 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 C1orf210Q8IVY1 113 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 CCDC83Q8IWF9 413 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 C4orf32Q8N8J7 132 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 SHDQ96IW2 340 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 UROC1Q96N76 676 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 DNMT3BQ9UBC3 853 aaKnown RBP19.11■□□□□ 0.65
COL9A1-210ENST00000493682 LIMCH1Q9UPQ0 1083 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 BACE2Q9Y5Z0 518 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 CDY1Q9Y6F8 540 aa19.11■□□□□ 0.65
COL9A1-210ENST00000493682 I3L4J1 428 aa19.1■□□□□ 0.65
COL9A1-210ENST00000493682 K7ERI5 159 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms