RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 HAUS6Q7Z4H7 955 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 TRIM50Q86XT4 487 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 IRF2BP1Q8IU81 584 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 C12orf56Q8IXR9 622 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 GALNT15Q8N3T1 639 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 PHC3Q8NDX5 983 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 CD99L2Q8TCZ2 262 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 PXYLP1Q8TE99 480 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 XPO4Q9C0E2 1151 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 KMT5AQ9NQR1 393 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 RRN3P2A6NIE6 340 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 H3BRB1 525 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 CETN3O15182 167 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 EIF3HO15372 352 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 SLC16A3O15427 465 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 ASAP2O43150 1006 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 SEPT4O43236 478 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 DYNC1LI2O43237 492 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 ATP6V1G1O75348 118 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 F2P00734 622 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 HMGCRP04035 888 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 EIF4BP23588 611 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 MARK3P27448 753 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 COPB1P53618 953 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 GJA9P57773 515 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 MXD4Q14582 209 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 KRT31Q15323 416 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 KBTBD12Q3ZCT8 623 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 MAEAQ7L5Y9 396 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 SLC9A9Q8IVB4 645 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 MAP4K3Q8IVH8 894 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 NELFCDQ8IXH7 590 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 IQCF2Q8IXL9 164 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 RETREG2Q8NC44 543 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM161BQ8NDZ6 487 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 TRPV1Q8NER1 839 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 CNOT6LQ96LI5 555 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 TSC22D3Q99576 134 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 SH2D3AQ9BRG2 576 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 KATNAL1Q9BW62 490 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 EPC1Q9H2F5 836 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 TUT1Q9H6E5 874 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 GPRC5CQ9NQ84 441 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 ARHGAP28Q9P2N2 729 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 SCN10AQ9Y5Y9 1956 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 TGFB1I1O43294 461 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 CREB3O43889 395 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 C22orf31O95567 290 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 DNM2P50570 870 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 POU5F1BQ06416 359 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 TUBB2AQ13885 445 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 NR1I3Q14994 352 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 MAP3K21Q5TCX8 1036 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 BCAS4Q8TDM0 211 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 PSPC1Q8WXF1 523 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 JAKMIP2Q96AA8 810 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 MKNK1Q9BUB5 465 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 TUBB2BQ9BVA1 445 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM134Q9H6X4 195 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 SPC25Q9HBM1 224 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 ITIH6Q6UXX5 1313 aa7.79□□□□□ -1.16
SMARCE1-211ENST00000493660 CCDC169A6NNP5 214 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 HAS3O00219 553 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 MAPK13O15264 365 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 SLC16A4O15374 487 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 ADCY3O60266 1144 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 NR3C1P04150 777 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 ZNF286BP0CG31 522 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 INSRRP14616 1297 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 GLRA2P23416 452 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 MPP3Q13368 585 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 TFDP1Q14186 410 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 FSCN1Q16658 493 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 MAN2A1Q16706 1144 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 ZC2HC1CQ53FD0 456 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 TRMT1LQ7Z2T5 733 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 FRMD5Q7Z6J6 570 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 VSTM4Q8IW00 320 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 SYCP3Q8IZU3 236 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 LINC01465Q8N7H1 131 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 GBP7Q8N8V2 638 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 SLAIN1Q8ND83 568 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 FAM76AQ8TAV0 307 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 ASAP3Q8TDY4 903 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 BSNDQ8WZ55 320 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 FAM81BQ96LP2 452 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 PHACTR1Q9C0D0 580 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 YIPF3Q9GZM5 350 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 C2orf40Q9H1Z8 148 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 RNPEPQ9H4A4 650 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 METTL14Q9HCE5 456 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 POLD4Q9HCU8 107 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 DMAC2Q9NW81 257 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 TBX20Q9UMR3 447 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 DENND3A2RUS2 1198 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 LGALS16A8MUM7 142 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 KIAA0391O15091 583 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 KIF5CO60282 957 aa7.78□□□□□ -1.16
SMARCE1-211ENST00000493660 MGRN1O60291 552 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms