RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TCRBV5S4A2TA0A5A2 114 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 GOLGA8BA8MQT2 603 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 KCNJ18B7U540 433 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 GYG2O15488 501 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TRMUO75648 421 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 PSMG1O95456 288 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 CAPN1P07384 714 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 HOXD13P35453 343 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 BCAP31P51572 246 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 POLGP54098 1239 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ERVK-9P63128 1117 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ZBTB16Q05516 673 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 KCNJ12Q14500 433 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 BCL2A1Q16548 175 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 MMEL1Q495T6 779 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TMEM63BQ5T3F8 832 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 C6orf118Q5T5N4 469 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 RFWD3Q6PCD5 774 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 AACSQ86V21 672 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 CACTIN-AS1Q8N1I8 211 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 GALNT4Q8N4A0 578 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 C7orf57Q8NEG2 295 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 MRPL1Q9BYD6 325 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ISCUQ9H1K1 167 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 PRKCIP41743 596 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 SKIV2L2P42285 1042 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 GSSP48637 474 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 WTAPQ15007 396 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 HLFQ16534 295 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TMC5Q6UXY8 1006 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 FASTKD5Q7L8L6 764 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 NRG4Q8WWG1 115 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ATXN2LQ8WWM7 1075 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ACAP3Q96P50 834 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 AP1M1Q9BXS5 423 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 KLHL4Q9C0H6 718 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 RNF38Q9H0F5 515 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 NT5C3AQ9H0P0 336 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 METTL14Q9HCE5 456 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 WDR6Q9NNW5 1121 aaKnown RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 NLRC4Q9NPP4 1024 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 COMMD8Q9NX08 183 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 NKIRAS1Q9NYS0 192 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 CEP72Q9P209 647 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 PACSIN2Q9UNF0 486 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-205ENST00000493587 TACC3Q9Y6A5 838 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 WASF2Q9Y6W5 498 aa7.28□□□□□ -1.24
VPS13B-205ENST00000493587 ARPC4-TTLL3A0A0A6YYG9 625 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 SH3PXD2BA1X283 911 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CCDC162PA2VCL2 907 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 E9PBE3 544 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 H7C1D1 291 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 RNF113AO15541 343 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CIB2O75838 187 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 ALDH2P05091 517 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CASP1P29466 404 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 IST1P53990 364 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 KRT76Q01546 638 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 TUBA3CQ13748 450 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 SPIDRQ14159 915 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF423Q2M1K9 1284 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 SNRNP48Q6IEG0 339 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 DSTYKQ6XUX3 929 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CCDC25Q86WR0 208 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CCDC125Q86Z20 511 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 BBS5Q8N3I7 341 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 LSM14AQ8ND56 463 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 SH3TC2Q8TF17 1288 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 IRGQQ8WZA9 623 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 STAMQ92783 540 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 GSDMAQ96QA5 445 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CRNKL1Q9BZJ0 848 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CLK4Q9HAZ1 481 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 RRN3Q9NYV6 651 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 C9orf78Q9NZ63 289 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 SPEF1Q9Y4P9 236 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 MYH10P35580 1976 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 PAPPA2Q9BXP8 1791 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 A6NL46 340 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 KCNK3O14649 394 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 PFDN6O15212 129 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 RNASEH1O60930 286 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 PABPC1P11940 636 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 PRKACAP17612 351 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 ITPK1Q13572 414 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 RASA2Q15283 850 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 Q6ZNX1 250 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CLVS1Q8IUQ0 354 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 ALDH16A1Q8IZ83 802 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 GALNT6Q8NCL4 622 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 ACMSDQ8TDX5 336 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 DACT3Q96B18 629 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 FMO2Q99518 471 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 ECSITQ9BQ95 431 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 DDX47Q9H0S4 455 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 CCSER2Q9H7U1 834 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 MARCH7Q9H992 704 aa7.27□□□□□ -1.25
VPS13B-205ENST00000493587 XAB2Q9HCS7 855 aaKnown RBP7.27□□□□□ -1.25
VPS13B-205ENST00000493587 PIH1D3Q9NQM4 214 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms