RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 GOLGA6L3A6NEY3 463 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 AP5Z1O43299 807 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 ZSCAN20P17040 1043 aaPredicted RBP10.19□□□□□ -0.78
CSTF1-206ENST00000493039 AKAP5P24588 427 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 GRM5P41594 1212 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 MATR3P43243 847 aaKnown RBP eCLIP10.19□□□□□ -0.78
CSTF1-206ENST00000493039 MARSP56192 900 aaKnown RBP10.19□□□□□ -0.78
CSTF1-206ENST00000493039 DLG4P78352 724 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 DCAF4L1Q3SXM0 396 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.19□□□□□ -0.78
CSTF1-206ENST00000493039 AGMOQ6ZNB7 445 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 SLC24A5Q71RS6 500 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 ECHDC2Q86YB7 292 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 TMEM130Q8N3G9 435 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 TMEM199Q8N511 208 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 GSTCDQ8NEC7 633 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 LPPQ93052 612 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 IL23AQ9NPF7 189 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 CHD9Q3L8U1 2897 aa10.19□□□□□ -0.78
CSTF1-206ENST00000493039 TTC26A0AVF1 554 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 LRRC10BA6NIK2 292 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 CXCL8P10145 99 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 PSMC2P35998 433 aaKnown RBP10.18□□□□□ -0.78
CSTF1-206ENST00000493039 CNKSR3Q6P9H4 555 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 TRIM59Q8IWR1 403 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 APBB2Q92870 758 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 ZMAT2Q96NC0 199 aaKnown RBP10.18□□□□□ -0.78
CSTF1-206ENST00000493039 POP1Q99575 1024 aaKnown RBP10.18□□□□□ -0.78
CSTF1-206ENST00000493039 ADPGKQ9BRR6 497 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 MKNK1Q9BUB5 465 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 FTHL17Q9BXU8 183 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 PRKAG2Q9UGJ0 569 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 PTPRJQ12913 1337 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 FSD2A1L4K1 749 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 ZNF233A6NK53 670 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 SMTNL1A8MU46 457 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 BECN2A8MW95 431 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 KIAA0391O15091 583 aaKnown RBP10.18□□□□□ -0.78
CSTF1-206ENST00000493039 MAPK13O15264 365 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 SLC16A3O15427 465 aaKnown RBP10.18□□□□□ -0.78
CSTF1-206ENST00000493039 RECQL4O94761 1208 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 CLTAP09496 248 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 RGS19P49795 217 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 CYP24A1Q07973 514 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 XKR4Q5GH76 650 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 TCP11X2Q5H9J9 407 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 TMEM240Q5SV17 173 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 ZNF365Q70YC5 407 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 GET4Q7L5D6 327 aaPredicted RBP10.18□□□□□ -0.78
CSTF1-206ENST00000493039 BRSK2Q8IWQ3 736 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 FAM186BQ8IYM0 893 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 PARD3BQ8TEW8 1205 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 NOC3LQ8WTT2 800 aaKnown RBP10.18□□□□□ -0.78
CSTF1-206ENST00000493039 ZNF516Q92618 1163 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 CNOT6LQ96LI5 555 aaKnown RBP10.18□□□□□ -0.78
CSTF1-206ENST00000493039 PDE11AQ9HCR9 933 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 MIOSQ9NXC5 875 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 CHD7Q9P2D1 2997 aa10.18□□□□□ -0.78
CSTF1-206ENST00000493039 LACTBL1A8MY62 500 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 KCNJ18B7U540 433 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 LDHAP00338 332 aaKnown RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 CLDN10P78369 228 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 FPGSQ05932 587 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 SPAG1Q07617 926 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 KCNJ12Q14500 433 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 KRT31Q15323 416 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 MIIPQ5JXC2 388 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 OTOP2Q7RTS6 562 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 FRMD5Q7Z6J6 570 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 TMCO2Q7Z6W1 182 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 RPUSD2Q8IZ73 545 aaKnown RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 SLC35C1Q96A29 364 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 ZFP42Q96MM3 310 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 ACAP3Q96P50 834 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.17□□□□□ -0.781e-7■■■□□ 14.9
CSTF1-206ENST00000493039 APOL6Q9BWW8 343 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 TRIM6Q9C030 488 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 KIAA1586Q9HCI6 787 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 TOPORSQ9NS56 1045 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 RBAKQ9NYW8 714 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 KLK14Q9P0G3 267 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 CXXC1Q9P0U4 656 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 PLAGL2Q9UPG8 496 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 FRMD4BQ9Y2L6 1034 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 TRIM49P0CI25 452 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 TRIM49CP0CI26 452 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 PPP3CAQ08209 521 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 IKBKEQ14164 716 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 PSMD6Q15008 389 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 TPD52L1Q16890 204 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 CLLU1OSQ5K130 101 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 EFCAB13Q8IY85 973 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 CCDC127Q96BQ5 260 aa10.17□□□□□ -0.78
CSTF1-206ENST00000493039 ARMCX3Q9UH62 379 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 LIMA1Q9UHB6 759 aaKnown RBP10.17□□□□□ -0.78
CSTF1-206ENST00000493039 LTBP2Q14767 1821 aa10.16□□□□□ -0.78
CSTF1-206ENST00000493039 TTC3P53804 2025 aa10.16□□□□□ -0.78
CSTF1-206ENST00000493039 ABHD14A-ACY1A0A1B0GW23 586 aa10.16□□□□□ -0.78
CSTF1-206ENST00000493039 LRRIQ3A6PVS8 624 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms