RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SP100P23497 879 aaPredicted RBP12.93□□□□□ -0.34
MDC1-207ENST00000492462 KLRC2P26717 231 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 GRM5P41594 1212 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 CLCN4P51793 760 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 SOX4Q06945 474 aaPredicted RBP12.93□□□□□ -0.34
MDC1-207ENST00000492462 GIT2Q14161 759 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 SEZ6Q53EL9 994 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 FOXD4L5Q5VV16 416 aaPredicted RBP12.93□□□□□ -0.34
MDC1-207ENST00000492462 RASSF8Q8NHQ8 419 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 FOXD4L4Q8WXT5 416 aaPredicted RBP12.93□□□□□ -0.34
MDC1-207ENST00000492462 PPP1R10Q96QC0 940 aaKnown RBP12.93□□□□□ -0.34
MDC1-207ENST00000492462 TCHPQ9BT92 498 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 PHF7Q9BWX1 381 aaPredicted RBP12.93□□□□□ -0.34
MDC1-207ENST00000492462 HAPLN2Q9GZV7 340 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 GOLGA2P5Q9HBQ8 144 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 CHST7Q9NS84 486 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 KCND2Q9NZV8 630 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 MUTYHQ9UIF7 546 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 ADAM28Q9UKQ2 775 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 SRPRBQ9Y5M8 271 aaKnown RBP12.93□□□□□ -0.34
MDC1-207ENST00000492462 DCHS1Q96JQ0 3298 aa12.93□□□□□ -0.34
MDC1-207ENST00000492462 TECTAO75443 2155 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 TADA2AO75478 443 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 RPL17P18621 184 aaKnown RBP12.92□□□□□ -0.34
MDC1-207ENST00000492462 NCKAP1LP55160 1127 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 DSG1Q02413 1049 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 PDCD11Q14690 1871 aaKnown RBP12.92□□□□□ -0.34
MDC1-207ENST00000492462 RTP2Q5QGT7 225 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 PRSS55Q6UWB4 352 aaPredicted RBP12.92□□□□□ -0.34
MDC1-207ENST00000492462 MPZL3Q6UWV2 235 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 CD300LGQ6UXG3 332 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 TMC5Q6UXY8 1006 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 HAUS6Q7Z4H7 955 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 GLYCTKQ8IVS8 523 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 TMEM130Q8N3G9 435 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 RIN2Q8WYP3 895 aaPredicted RBP12.92□□□□□ -0.34
MDC1-207ENST00000492462 LARP4BQ92615 738 aaKnown RBP12.92□□□□□ -0.34
MDC1-207ENST00000492462 ZMAT2Q96NC0 199 aaKnown RBP12.92□□□□□ -0.34
MDC1-207ENST00000492462 POP1Q99575 1024 aaKnown RBP12.92□□□□□ -0.34
MDC1-207ENST00000492462 EMILIN2Q9BXX0 1053 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 ADAM7Q9H2U9 754 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 POMKQ9H5K3 350 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 RXFP1Q9HBX9 757 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 ANKFY1Q9P2R3 1169 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 EPG5Q9HCE0 2579 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 MTCL1Q9Y4B5 1905 aaKnown RBP12.92□□□□□ -0.34
MDC1-207ENST00000492462 BAHCC1Q9P281 2608 aa12.92□□□□□ -0.34
MDC1-207ENST00000492462 DOCK6Q96HP0 2047 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 A0A087X0B3 334 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 DCXO43602 365 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 FAM13AO94988 1023 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 BRD1O95696 1058 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 KRT18P05783 430 aaKnown RBP12.91□□□□□ -0.34
MDC1-207ENST00000492462 SPATA31D3P0C874 917 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 MCF2P10911 925 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 CLCNKBP51801 687 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 ZNF131P52739 623 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 SMTNP53814 917 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 STRN3Q13033 797 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 SLC39A14Q15043 492 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 USP41Q3LFD5 358 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 XKR4Q5GH76 650 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 KIAA1841Q6NSI8 718 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 ALKAL1Q6UXT8 129 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 SPATA31D4Q6ZUB0 917 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 HSCBQ8IWL3 235 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 MYCT1Q8N699 235 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 C3orf58Q8NDZ4 430 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 FIZ1Q96SL8 496 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 CCDC94Q9BW85 323 aaPredicted RBP12.91□□□□□ -0.34
MDC1-207ENST00000492462 PANK2Q9BZ23 570 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 ZHX3Q9H4I2 956 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 DZANK1Q9NVP4 752 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 LARSQ9P2J5 1176 aaKnown RBP12.91□□□□□ -0.34
MDC1-207ENST00000492462 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
MDC1-207ENST00000492462 STK39Q9UEW8 545 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
MDC1-207ENST00000492462 I3L4J1 428 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 K7ENM7 598 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 TOM1L1O75674 476 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 KRT37O76014 449 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 ALADP13716 330 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 NMT1P30419 496 aaKnown RBP12.9□□□□□ -0.34
MDC1-207ENST00000492462 DDIT3P35638 169 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 NASPP49321 788 aaPredicted RBP12.9□□□□□ -0.34
MDC1-207ENST00000492462 ITIH3Q06033 890 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 PKP1Q13835 747 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 SLC10A6Q3KNW5 377 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 FOXD4L6Q3SYB3 417 aaPredicted RBP12.9□□□□□ -0.34
MDC1-207ENST00000492462 FAM171A1Q5VUB5 890 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 CES5AQ6NT32 575 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 FOXD4L3Q6VB84 417 aaPredicted RBP12.9□□□□□ -0.34
MDC1-207ENST00000492462 ZPBP2Q6X784 338 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 DYMQ7RTS9 669 aa12.9□□□□□ -0.34
MDC1-207ENST00000492462 APBB1IPQ7Z5R6 666 aaPredicted RBP12.9□□□□□ -0.34
MDC1-207ENST00000492462 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms