RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 AAGABQ6PD74 315 aa10.32□□□□□ -0.76
VPS8-225ENST00000492449 C3orf67Q6ZVT6 689 aa10.32□□□□□ -0.76
VPS8-225ENST00000492449 EPM2AIP1Q7L775 607 aaPredicted RBP10.32□□□□□ -0.76
VPS8-225ENST00000492449 AAASQ9NRG9 546 aa10.32□□□□□ -0.76
VPS8-225ENST00000492449 PPP1R9AQ9ULJ8 1098 aa10.32□□□□□ -0.76
VPS8-225ENST00000492449 COL4A3BPQ9Y5P4 624 aa10.32□□□□□ -0.76
VPS8-225ENST00000492449 ADAMTSL3P82987 1691 aa10.32□□□□□ -0.76
VPS8-225ENST00000492449 ZMYM2Q9UBW7 1377 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 IPO5O00410 1097 aaKnown RBP10.31□□□□□ -0.76
VPS8-225ENST00000492449 CDH16O75309 829 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 FKBP6O75344 327 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 TTC4O95801 387 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 TFAP2AP05549 437 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 H2AFZP0C0S5 128 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 RARBP10826 455 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 S100A1P23297 94 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 CREB5Q02930 508 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 NR1H3Q13133 447 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 DNAJC3Q13217 504 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 LPIN1Q14693 890 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 TMEM63BQ5T3F8 832 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 DPY19L2P1Q6NXN4 242 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 RHBDF2Q6PJF5 856 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 H2AFVQ71UI9 128 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 MTDHQ86UE4 582 aaKnown RBP10.31□□□□□ -0.76
VPS8-225ENST00000492449 CCT7Q99832 543 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 STK33Q9BYT3 514 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 ARL8BQ9NVJ2 186 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 HEY1Q9Y5J3 304 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 NUMBLQ9Y6R0 609 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 SYNGAP1Q96PV0 1343 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 MYL6BP14649 208 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 PLCG1P19174 1290 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 AMPD1P23109 780 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
VPS8-225ENST00000492449 ACTR3P61158 418 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 SPARCL1Q14515 664 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 TXNRD1Q16881 649 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 KCTD19Q17RG1 926 aaPredicted RBP10.31□□□□□ -0.76
VPS8-225ENST00000492449 PACS1Q6VY07 963 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 FAM186BQ8IYM0 893 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 C18orf8Q96DM3 657 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 HSPBAP1Q96EW2 488 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 CEP63Q96MT8 703 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 BIRC8Q96P09 236 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 BTBD9Q96Q07 612 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 TAS2R1Q9NYW7 299 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 WHRNQ9P202 907 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 THEGQ9P2T0 379 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 ASAP1Q9ULH1 1129 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 V9GY48 417 aaPredicted RBP10.31□□□□□ -0.76
VPS8-225ENST00000492449 CNTNAP5Q8WYK1 1306 aa10.31□□□□□ -0.76
VPS8-225ENST00000492449 LSM1O15116 133 aaKnown RBP10.3□□□□□ -0.76
VPS8-225ENST00000492449 HAUS5O94927 633 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 GSTT2P0CG29 244 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 GSTT2BP0CG30 244 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 TRPC1P48995 793 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 USP41Q3LFD5 358 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 ANKRD20A4Q4UJ75 823 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 VPS52Q8N1B4 723 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 PRELID2Q8N945 189 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 SYT2Q8N9I0 419 aaPredicted RBP10.3□□□□□ -0.76
VPS8-225ENST00000492449 SLCO2A1Q92959 643 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 TTC25Q96NG3 672 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 MRPS26Q9BYN8 205 aaKnown RBP10.3□□□□□ -0.76
VPS8-225ENST00000492449 NAPBQ9H115 298 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 KDM4FA0A1W2PPD8 638 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 PP2D1A8MPX8 630 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 FBP2O00757 339 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 STK10O94804 968 aaKnown RBP10.3□□□□□ -0.76
VPS8-225ENST00000492449 CALM1P0DP23 149 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 CALM2P0DP24 149 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 CALM3P0DP25 149 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 EXOC3L4Q17RC7 722 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 RSPH3Q86UC2 560 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 ALLCQ8N6M5 410 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 SKA1Q96BD8 255 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 TSG101Q99816 390 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 PLGRKTQ9HBL7 147 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 TRAF3IP3Q9Y228 551 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 TDRKHQ9Y2W6 561 aaKnown RBP10.3□□□□□ -0.76
VPS8-225ENST00000492449 ZNF532Q9HCE3 1301 aa10.3□□□□□ -0.76
VPS8-225ENST00000492449 TP73O15350 636 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 CSDE1O75534 798 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 TRMUO75648 421 aaKnown RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 COL6A2P12110 1019 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 VCLP18206 1134 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 EPS15P42566 896 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 MCAMP43121 646 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 MSLNQ13421 630 aaPredicted RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 PDK3Q15120 406 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 FYB2Q5VWT5 728 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 TTC27Q6P3X3 843 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 OTOAQ7RTW8 1153 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 LRRC6Q86X45 466 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 TRIM59Q8IWR1 403 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 C12orf50Q8NA57 414 aaPredicted RBP10.29□□□□□ -0.76
VPS8-225ENST00000492449 FAM172AQ8WUF8 416 aa10.29□□□□□ -0.76
VPS8-225ENST00000492449 MAML1Q92585 1016 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 292 ms